RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 CDRT15Q96T59 188 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 SLC39A3Q9BRY0 314 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 LMF2Q9BU23 707 aaKnown RBP7.09□□□□□ -1.27
EPHA3-201ENST00000336596 CRB3Q9BUF7 120 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 ABCG8Q9H221 673 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 TMLHEQ9NVH6 421 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 ARMCX1Q9P291 453 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 DKK3Q9UBP4 350 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 CDH22Q9UJ99 828 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 PAIP2BQ9ULR5 123 aaKnown RBP7.09□□□□□ -1.27
EPHA3-201ENST00000336596 LRRC37AA6NMS7 1700 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 IGLON5A6NGN9 336 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 LSM1O15116 133 aaKnown RBP7.09□□□□□ -1.27
EPHA3-201ENST00000336596 AQP9O43315 295 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 CLDN7O95471 211 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 ANGPTL1O95841 491 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 BPGMP07738 259 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 UQCRC2P22695 453 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 SLC6A9P48067 706 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 EMP2P54851 167 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 TMBIM6P55061 237 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 LIPEQ05469 1076 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 ARHGAP19Q14CB8 494 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 LRRTM3Q86VH5 581 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 ZNF227Q86WZ6 799 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 TMEM151BQ8IW70 566 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 AMER2Q8N7J2 671 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 OR14L1PQ8NHC6 308 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 NKD1Q969G9 470 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 SLC25A36Q96CQ1 311 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 ZFYVE21Q9BQ24 234 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 CHID1Q9BWS9 393 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 NPLQ9BXD5 320 aaPredicted RBP7.09□□□□□ -1.27
EPHA3-201ENST00000336596 PIF1Q9H611 641 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 ZIM2Q9NZV7 527 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 ARL5AQ9Y689 179 aa7.09□□□□□ -1.27
EPHA3-201ENST00000336596 RTCAO00442 366 aaKnown RBP7.09□□□□□ -1.28
EPHA3-201ENST00000336596 DLGAP3O95886 979 aa7.09□□□□□ -1.28
EPHA3-201ENST00000336596 NPPAP01160 153 aa7.09□□□□□ -1.28
EPHA3-201ENST00000336596 SHBGP04278 402 aa7.09□□□□□ -1.28
EPHA3-201ENST00000336596 C8BP07358 591 aa7.09□□□□□ -1.28
EPHA3-201ENST00000336596 ZNF12P17014 697 aa7.09□□□□□ -1.28
EPHA3-201ENST00000336596 IDH2P48735 452 aaKnown RBP7.09□□□□□ -1.28
EPHA3-201ENST00000336596 OR2B6P58173 313 aa7.09□□□□□ -1.28
EPHA3-201ENST00000336596 USP46P62068 366 aa7.09□□□□□ -1.28
EPHA3-201ENST00000336596 ERVK-8P63133 956 aa7.09□□□□□ -1.28
EPHA3-201ENST00000336596 EEF1A1P68104 462 aaKnown RBP7.09□□□□□ -1.28
EPHA3-201ENST00000336596 GPLD1P80108 840 aa7.09□□□□□ -1.28
EPHA3-201ENST00000336596 NRG1Q02297 640 aaPredicted RBP7.09□□□□□ -1.28
EPHA3-201ENST00000336596 EEF1A2Q05639 463 aaKnown RBP7.09□□□□□ -1.28
EPHA3-201ENST00000336596 SLC10A7Q0GE19 358 aa7.09□□□□□ -1.28
EPHA3-201ENST00000336596 EEF1A1P5Q5VTE0 462 aa7.09□□□□□ -1.28
EPHA3-201ENST00000336596 OLFML2AQ68BL7 652 aa7.09□□□□□ -1.28
EPHA3-201ENST00000336596 SLC25A25Q6KCM7 469 aa7.09□□□□□ -1.28
EPHA3-201ENST00000336596 METTL2BQ6P1Q9 378 aaKnown RBP7.09□□□□□ -1.28
EPHA3-201ENST00000336596 NCEH1Q6PIU2 408 aa7.09□□□□□ -1.28
EPHA3-201ENST00000336596 ABRAXAS1Q6UWZ7 409 aa7.09□□□□□ -1.28
EPHA3-201ENST00000336596 CCDC103Q8IW40 242 aa7.09□□□□□ -1.28
EPHA3-201ENST00000336596 OR8H2Q8N162 312 aa7.09□□□□□ -1.28
EPHA3-201ENST00000336596 LRRC25Q8N386 305 aaPredicted RBP7.09□□□□□ -1.28
EPHA3-201ENST00000336596 CPEB3Q8NE35 698 aaKnown RBP7.09□□□□□ -1.28
EPHA3-201ENST00000336596 DDHD1Q8NEL9 900 aa7.09□□□□□ -1.28
EPHA3-201ENST00000336596 PROKR2Q8NFJ6 384 aa7.09□□□□□ -1.28
EPHA3-201ENST00000336596 OR2L5Q8NG80 312 aa7.09□□□□□ -1.28
EPHA3-201ENST00000336596 TCTN2Q96GX1 697 aa7.09□□□□□ -1.28
EPHA3-201ENST00000336596 UTP23Q9BRU9 249 aaKnown RBP7.09□□□□□ -1.28
EPHA3-201ENST00000336596 C1orf50Q9BV19 199 aa7.09□□□□□ -1.28
EPHA3-201ENST00000336596 OR8D2Q9GZM6 311 aa7.09□□□□□ -1.28
EPHA3-201ENST00000336596 NLGN3Q9NZ94 848 aa7.09□□□□□ -1.28
EPHA3-201ENST00000336596 MBD2Q9UBB5 411 aa7.09□□□□□ -1.28
EPHA3-201ENST00000336596 KLHL21Q9UJP4 597 aa7.09□□□□□ -1.28
EPHA3-201ENST00000336596 EMC9Q9Y3B6 208 aa7.09□□□□□ -1.28
EPHA3-201ENST00000336596 PRKAB1Q9Y478 270 aa7.09□□□□□ -1.28
EPHA3-201ENST00000336596 NUMBLQ9Y6R0 609 aa7.09□□□□□ -1.28
EPHA3-201ENST00000336596 LINC01553A4QN01 128 aa7.08□□□□□ -1.28
EPHA3-201ENST00000336596 C2orf78A6NCI8 922 aa7.08□□□□□ -1.28
EPHA3-201ENST00000336596 EMC8O43402 210 aa7.08□□□□□ -1.28
EPHA3-201ENST00000336596 CDC40O60508 579 aaKnown RBP eCLIP7.08□□□□□ -1.28
EPHA3-201ENST00000336596 CPNE3O75131 537 aaKnown RBP7.08□□□□□ -1.28
EPHA3-201ENST00000336596 KRT36O76013 467 aa7.08□□□□□ -1.28
EPHA3-201ENST00000336596 WNT11O96014 354 aa7.08□□□□□ -1.28
EPHA3-201ENST00000336596 MT-CO1P00395 513 aa7.08□□□□□ -1.28
EPHA3-201ENST00000336596 C2P06681 752 aa7.08□□□□□ -1.28
EPHA3-201ENST00000336596 MECP2P51608 486 aaKnown RBP7.08□□□□□ -1.28
EPHA3-201ENST00000336596 CCR5P51681 352 aa7.08□□□□□ -1.28
EPHA3-201ENST00000336596 SCAPQ12770 1279 aa7.08□□□□□ -1.28
EPHA3-201ENST00000336596 BLMHQ13867 455 aa7.08□□□□□ -1.28
EPHA3-201ENST00000336596 KCTD11Q693B1 232 aa7.08□□□□□ -1.28
EPHA3-201ENST00000336596 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.08□□□□□ -1.28
EPHA3-201ENST00000336596 WDTC1Q8N5D0 677 aa7.08□□□□□ -1.28
EPHA3-201ENST00000336596 TTC9BQ8N6N2 239 aa7.08□□□□□ -1.28
EPHA3-201ENST00000336596 SETD6Q8TBK2 473 aa7.08□□□□□ -1.28
EPHA3-201ENST00000336596 CRISPLD1Q9H336 500 aa7.08□□□□□ -1.28
EPHA3-201ENST00000336596 TMEM59LQ9UK28 342 aa7.08□□□□□ -1.28
EPHA3-201ENST00000336596 PTRH2Q9Y3E5 179 aaKnown RBP7.08□□□□□ -1.28
EPHA3-201ENST00000336596 NRP2O60462 931 aa7.08□□□□□ -1.28
EPHA3-201ENST00000336596 GPIP06744 558 aa7.08□□□□□ -1.28
EPHA3-201ENST00000336596 C1GALT1C1LP0DN25 315 aa7.08□□□□□ -1.28
EPHA3-201ENST00000336596 IMPDH1P20839 514 aa7.08□□□□□ -1.28
EPHA3-201ENST00000336596 BMP8BP34820 402 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms