RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 ERAP2Q6P179 960 aa15.9■□□□□ 0.14
CDC42EP4-201ENST00000335793 PRSS48Q7RTY5 328 aa15.9■□□□□ 0.14
CDC42EP4-201ENST00000335793 TMPRSS11BQ86T26 416 aa15.9■□□□□ 0.14
CDC42EP4-201ENST00000335793 SLC51BQ86UW2 128 aa15.9■□□□□ 0.14
CDC42EP4-201ENST00000335793 C11orf65Q8NCR3 313 aa15.9■□□□□ 0.14
CDC42EP4-201ENST00000335793 OR52E4Q8NGH9 312 aa15.9■□□□□ 0.14
CDC42EP4-201ENST00000335793 SNAPC3Q92966 411 aa15.9■□□□□ 0.14
CDC42EP4-201ENST00000335793 RERGLQ9H628 205 aa15.9■□□□□ 0.14
CDC42EP4-201ENST00000335793 ELAC1Q9H777 363 aaKnown RBP15.9■□□□□ 0.14
CDC42EP4-201ENST00000335793 STSP08842 583 aa15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 JUPP14923 745 aa15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 GADD45AP24522 165 aa15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 CHI3L1P36222 383 aaPredicted RBP15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 LIPAP38571 399 aa15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 GANABQ14697 944 aaKnown RBP15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 PROX2Q3B8N5 592 aa15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 ZNF404Q494X3 552 aa15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 CAPN13Q6MZZ7 669 aaPredicted RBP15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 AMER2Q8N7J2 671 aa15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 MKRN2Q9H000 416 aaKnown RBP15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 ZNF334Q9HCZ1 680 aaPredicted RBP15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 RAD18Q9NS91 495 aa15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 ASIC5Q9NY37 505 aa15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 GPR83Q9NYM4 423 aa15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 RNF6Q9Y252 685 aa15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 PCDHB11Q9Y5F2 797 aa15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 NINQ8N4C6 2090 aa15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 TRBV5-4A0A0C4DH59 114 aa15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 RGS5O15539 181 aa15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 URODP06132 367 aa15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 HOXB6P17509 224 aaKnown RBP15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 PTPN6P29350 595 aa15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 CTSKP43235 329 aa15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 SP3Q02447 781 aa15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 Q5BKY6 102 aa15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 IGSF11Q5DX21 431 aa15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 CBLL1Q75N03 491 aa15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 CHPFQ8IZ52 775 aa15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 OR10G2Q8NGC3 310 aa15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 MYDGFQ969H8 173 aa15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 IGSF21Q96ID5 467 aa15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 FAM83DQ9H4H8 585 aa15.89■□□□□ 0.13
CDC42EP4-201ENST00000335793 GABRR3A8MPY1 467 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 POLR1CO15160 346 aaPredicted RBP15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 SRCP12931 536 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 ETFAP13804 333 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 ACPPP15309 386 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 HOXA9P31269 272 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 MVKQ03426 396 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 FCHO2Q0JRZ9 810 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 TP53BP2Q13625 1128 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 ZMYND11Q15326 602 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 PTOV1Q86YD1 416 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 ENTHD1Q8IYW4 607 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 SLC5A8Q8N695 610 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 CHST14Q8NCH0 376 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 DYNC2LI1Q8TCX1 351 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 IPCEF1Q8WWN9 437 aaPredicted RBP15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 POP5Q969H6 163 aaKnown RBP15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 SLC38A4Q969I6 547 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 ALG14Q96F25 216 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 ZC4H2Q9NQZ6 224 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 FAM120CQ9NX05 1096 aaKnown RBP15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 ACSL6Q9UKU0 697 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 RAB23Q9ULC3 237 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 NDRG4Q9ULP0 352 aaKnown RBP15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 PCDH7O60245 1069 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 BDKRB1P46663 353 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 OR2B6P58173 313 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 CAP1Q01518 475 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 MPPE1Q53F39 396 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 IER5LQ5T953 404 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 NXNL2Q5VZ03 156 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 AGTRAPQ6RW13 159 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 SZRD1Q7Z422 152 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 MFSD4AQ8N468 514 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 VMP1Q96GC9 406 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 ZNF300Q96RE9 604 aaPredicted RBP15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 RNF167Q9H6Y7 350 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 RHCGQ9UBD6 479 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 A0A1W2PRU2 124 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 SLC10A3P09131 477 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 ICAM2P13598 275 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 GRK3P35626 688 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 MAGEA2P43356 314 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 CXCR4P61073 352 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 LYSMD2Q8IV50 215 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 C2orf73Q8N5S3 287 aaPredicted RBP15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 LILRA3Q8N6C8 439 aaPredicted RBP15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 MINDY2Q8NBR6 621 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 YIPF6Q96EC8 236 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 TMEM175Q9BSA9 504 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 TSEN34Q9BSV6 310 aaKnown RBP15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 SLC25A13Q9UJS0 675 aa15.88■□□□□ 0.13
CDC42EP4-201ENST00000335793 A0A0G2JMP0 313 aa15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 YY2O15391 372 aa15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 TGFB1P01137 390 aa15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 DNTTP04053 509 aa15.87■□□□□ 0.13
CDC42EP4-201ENST00000335793 GPX2P18283 190 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms