RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 NDST2P52849 883 aa9.5□□□□□ -0.89
COL4A6-201ENST00000334504 CDCA2Q69YH5 1023 aaPredicted RBP9.5□□□□□ -0.89
COL4A6-201ENST00000334504 GOLGA7Q7Z5G4 137 aa9.5□□□□□ -0.89
COL4A6-201ENST00000334504 PIM3Q86V86 326 aa9.5□□□□□ -0.89
COL4A6-201ENST00000334504 ZFPM1Q8IX07 1006 aa9.5□□□□□ -0.89
COL4A6-201ENST00000334504 BOLLQ8N9W6 283 aaKnown RBP9.5□□□□□ -0.89
COL4A6-201ENST00000334504 ARNTL2Q8WYA1 636 aa9.5□□□□□ -0.89
COL4A6-201ENST00000334504 CD180Q99467 661 aa9.5□□□□□ -0.89
COL4A6-201ENST00000334504 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.5□□□□□ -0.89
COL4A6-201ENST00000334504 SLC28A3Q9HAS3 691 aa9.5□□□□□ -0.89
COL4A6-201ENST00000334504 GIMAP2Q9UG22 337 aa9.5□□□□□ -0.89
COL4A6-201ENST00000334504 LAMP5Q9UJQ1 280 aa9.5□□□□□ -0.89
COL4A6-201ENST00000334504 MGAT4BQ9UQ53 548 aa9.5□□□□□ -0.89
COL4A6-201ENST00000334504 CCDC163A0A0D9SF12 145 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 ZNF726A6NNF4 738 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 ADAMTS3O15072 1205 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 B4GALT4O60513 344 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 FKTNO75072 461 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 IFNA4P05014 189 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 OR4Q2P0C623 313 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 AKR1A1P14550 325 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 HOXC12P31275 282 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 L1CAMP32004 1257 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 DGKGP49619 791 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 BMXP51813 675 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 SLC26A5P58743 744 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 NCS1P62166 190 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 MLLT1Q03111 559 aaPredicted RBP9.49□□□□□ -0.89
COL4A6-201ENST00000334504 SLBPQ14493 270 aaKnown RBP eCLIP9.49□□□□□ -0.89
COL4A6-201ENST00000334504 GPR139Q6DWJ6 353 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 CEACAM20Q6UY09 585 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 CFAP77Q6ZQR2 320 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 PPA2Q9H2U2 334 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 MYNNQ9NPC7 610 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 PCDHB3Q9Y5E6 796 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 MANSC4A6NHS7 340 aaPredicted RBP9.49□□□□□ -0.89
COL4A6-201ENST00000334504 OR6C65A6NJZ3 312 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 CAPN14A8MX76 684 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 GRID2O43424 1007 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 SLC16A8O95907 504 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 HPRP00739 348 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 LCKP06239 509 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 PIK3CBP42338 1070 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 SNTB2Q13425 540 aaKnown RBP9.49□□□□□ -0.89
COL4A6-201ENST00000334504 EXOC3L2Q2M3D2 409 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 DESI1Q6ICB0 168 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 TATDN1Q6P1N9 297 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 ASRGL1Q7L266 308 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 TAC4Q86UU9 113 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 TREML1Q86YW5 311 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 GALNT13Q8IUC8 556 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 TFAP2BQ92481 460 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 LRCH3Q96II8 777 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 SECISBP2Q96T21 854 aaKnown RBP9.49□□□□□ -0.89
COL4A6-201ENST00000334504 SEC61A2Q9H9S3 476 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 MRPS30Q9NP92 439 aaKnown RBP9.49□□□□□ -0.89
COL4A6-201ENST00000334504 COPS7AQ9UBW8 275 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 NUFIP1Q9UHK0 495 aaKnown RBP9.49□□□□□ -0.89
COL4A6-201ENST00000334504 MRPS23Q9Y3D9 190 aaKnown RBP9.49□□□□□ -0.89
COL4A6-201ENST00000334504 AGLP35573 1532 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 FMO6PO60774 539 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 KCNJ13O60928 360 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 RFPL3O75679 317 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 RGS9O75916 674 aaPredicted RBP9.49□□□□□ -0.89
COL4A6-201ENST00000334504 MC2RQ01718 297 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 CD47Q08722 323 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 SPIN4Q56A73 249 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 OR4F6Q8NGB9 312 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 FANK1Q8TC84 345 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 OSTF1Q92882 214 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 MALSU1Q96EH3 234 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 PCBD2Q9H0N5 130 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 GALPQ9UBC7 116 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 CPQQ9Y646 472 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 MANBAO00462 879 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 CD34P28906 385 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 NSG1P42857 185 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 HLCSP50747 726 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 PRKXP51817 358 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 ABHD18Q0P651 414 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 PRAMEF13Q5VWM6 474 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 SLC39A4Q6P5W5 647 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 NDNFQ8TB73 568 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 CPNE5Q9HCH3 593 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 CD300AQ9UGN4 299 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 IFNA10P01566 189 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 STSP08842 583 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 DLDP09622 509 aaKnown RBP9.49□□□□□ -0.89
COL4A6-201ENST00000334504 EDNRBP24530 442 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 GSTM2P28161 218 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 RABGGTBP53611 331 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 KCNJ11Q14654 390 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 UBXN2BQ14CS0 331 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 CMPK2Q5EBM0 449 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 NKAPLQ5M9Q1 402 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 MEDAGQ5VYS4 303 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 PLPPR4Q7Z2D5 763 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 TMPRSS9Q7Z410 1059 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 LCN9Q8WX39 176 aa9.49□□□□□ -0.89
COL4A6-201ENST00000334504 IRGQQ8WZA9 623 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms