RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 OR52A4PA6NMU1 304 aa14.46□□□□□ -0.09
C9orf47-201ENST00000334490 FANCGO15287 622 aa14.46□□□□□ -0.09
C9orf47-201ENST00000334490 ABLIM3O94929 683 aa14.46□□□□□ -0.09
C9orf47-201ENST00000334490 PROS1P07225 676 aa14.46□□□□□ -0.09
C9orf47-201ENST00000334490 BCKDHAP12694 445 aa14.46□□□□□ -0.09
C9orf47-201ENST00000334490 FBLP22087 321 aaKnown RBP14.46□□□□□ -0.09
C9orf47-201ENST00000334490 PSMA1P25786 263 aaKnown RBP14.46□□□□□ -0.09
C9orf47-201ENST00000334490 CXorf57Q6NSI4 855 aaKnown RBP14.46□□□□□ -0.09
C9orf47-201ENST00000334490 TDHQ8IZJ6 230 aa14.46□□□□□ -0.09
C9orf47-201ENST00000334490 OR52E4Q8NGH9 312 aa14.46□□□□□ -0.09
C9orf47-201ENST00000334490 SH3YL1Q96HL8 342 aaPredicted RBP14.46□□□□□ -0.09
C9orf47-201ENST00000334490 PRODH2Q9UF12 536 aa14.46□□□□□ -0.09
C9orf47-201ENST00000334490 MYO18AQ92614 2054 aaKnown RBP14.46□□□□□ -0.09
C9orf47-201ENST00000334490 SDHDO14521 159 aa14.46□□□□□ -0.1
C9orf47-201ENST00000334490 EI24O14681 340 aa14.46□□□□□ -0.1
C9orf47-201ENST00000334490 RENP00797 406 aa14.46□□□□□ -0.1
C9orf47-201ENST00000334490 ISCA2Q86U28 154 aa14.46□□□□□ -0.1
C9orf47-201ENST00000334490 HUS1BQ8NHY5 278 aa14.46□□□□□ -0.1
C9orf47-201ENST00000334490 AP3S1Q92572 193 aa14.46□□□□□ -0.1
C9orf47-201ENST00000334490 EPYCQ99645 322 aa14.46□□□□□ -0.1
C9orf47-201ENST00000334490 DEFB126Q9BYW3 111 aa14.46□□□□□ -0.1
C9orf47-201ENST00000334490 ARHGEF3Q9NR81 526 aa14.46□□□□□ -0.1
C9orf47-201ENST00000334490 EIF3FO00303 357 aaPredicted RBP14.45□□□□□ -0.1
C9orf47-201ENST00000334490 CREG1O75629 220 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 IL1RNP18510 177 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 TNFRSF4P43489 277 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 SRP54P61011 504 aaKnown RBP14.45□□□□□ -0.1
C9orf47-201ENST00000334490 MRPS21P82921 87 aaKnown RBP14.45□□□□□ -0.1
C9orf47-201ENST00000334490 GRB7Q14451 532 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 ABRAXAS2Q15018 415 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 P4HA3Q7Z4N8 544 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 PEG10Q86TG7 708 aaKnown RBP14.45□□□□□ -0.1
C9orf47-201ENST00000334490 OR5AR1Q8NGP9 310 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 FUBP1Q96AE4 644 aaKnown RBP14.45□□□□□ -0.1
C9orf47-201ENST00000334490 DTD2Q96FN9 168 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 COQ7Q99807 217 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 SLC12A9Q9BXP2 914 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 PLEKHA1Q9HB21 404 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 GEMIN8Q9NWZ8 242 aaKnown RBP14.45□□□□□ -0.1
C9orf47-201ENST00000334490 C4BPBP20851 252 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 SNTA1Q13424 505 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 ANKRD54Q6NXT1 300 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 ZC3H14Q6PJT7 736 aaKnown RBP14.45□□□□□ -0.1
C9orf47-201ENST00000334490 RBM44Q6ZP01 1051 aaKnown RBP14.45□□□□□ -0.1
C9orf47-201ENST00000334490 ZFAND4Q86XD8 727 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 SMIM14Q96QK8 99 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 PTGES2Q9H7Z7 377 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 FAM92AA1XBS5 289 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 ECDO95905 644 aaPredicted RBP14.45□□□□□ -0.1
C9orf47-201ENST00000334490 KLKB1P03952 638 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 STAT5AP42229 794 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 TDGQ13569 410 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 LCN1P1Q5VSP4 162 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 LYSMD4Q5XG99 296 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 OR2T5Q6IEZ7 315 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 OR2T29Q8NH02 315 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 MYRFLQ96LU7 910 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 BCL2L14Q9BZR8 327 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 RHBDL2Q9NX52 303 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 MRPL39Q9NYK5 338 aaKnown RBP14.45□□□□□ -0.1
C9orf47-201ENST00000334490 IRAK3Q9Y616 596 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 REEP3Q6NUK4 255 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 KRTCAP2Q8N6L1 136 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 THAP3Q8WTV1 239 aaPredicted RBP14.45□□□□□ -0.1
C9orf47-201ENST00000334490 AURKBQ96GD4 344 aaPredicted RBP14.45□□□□□ -0.1
C9orf47-201ENST00000334490 AMBNQ9NP70 447 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 PTGDR2Q9Y5Y4 395 aa14.45□□□□□ -0.1
C9orf47-201ENST00000334490 HMGN1P05114 100 aa14.44□□□□□ -0.1
C9orf47-201ENST00000334490 RPS3P23396 243 aaKnown RBP eCLIP14.44□□□□□ -0.1
C9orf47-201ENST00000334490 DNAJA1P31689 397 aaKnown RBP14.44□□□□□ -0.1
C9orf47-201ENST00000334490 ARFIP1P53367 373 aa14.44□□□□□ -0.1
C9orf47-201ENST00000334490 ST3GAL3Q11203 375 aa14.44□□□□□ -0.1
C9orf47-201ENST00000334490 GRM7Q14831 915 aa14.44□□□□□ -0.1
C9orf47-201ENST00000334490 DEFB133Q30KQ1 61 aa14.44□□□□□ -0.1
C9orf47-201ENST00000334490 CYP27C1Q4G0S4 372 aa14.44□□□□□ -0.1
C9orf47-201ENST00000334490 C1orf189Q5VU69 101 aa14.44□□□□□ -0.1
C9orf47-201ENST00000334490 OR8K5Q8NH50 307 aa14.44□□□□□ -0.1
C9orf47-201ENST00000334490 ARRDC2Q8TBH0 407 aa14.44□□□□□ -0.1
C9orf47-201ENST00000334490 RHBDD1Q8TEB9 315 aa14.44□□□□□ -0.1
C9orf47-201ENST00000334490 UBASH3BQ8TF42 649 aa14.44□□□□□ -0.1
C9orf47-201ENST00000334490 OR5P2Q8WZ92 322 aa14.44□□□□□ -0.1
C9orf47-201ENST00000334490 TRIM43Q96BQ3 446 aaPredicted RBP14.44□□□□□ -0.1
C9orf47-201ENST00000334490 LDAHQ9H6V9 325 aa14.44□□□□□ -0.1
C9orf47-201ENST00000334490 ATXN10Q9UBB4 475 aa14.44□□□□□ -0.1
C9orf47-201ENST00000334490 GP1BBP13224 206 aa14.44□□□□□ -0.1
C9orf47-201ENST00000334490 GNALP38405 381 aa14.44□□□□□ -0.1
C9orf47-201ENST00000334490 IL12RB1P42701 662 aa14.44□□□□□ -0.1
C9orf47-201ENST00000334490 POU6F2P78424 691 aaPredicted RBP14.44□□□□□ -0.1
C9orf47-201ENST00000334490 CSTF1Q05048 431 aaKnown RBP14.44□□□□□ -0.1
C9orf47-201ENST00000334490 DEFB110Q30KQ9 67 aa14.44□□□□□ -0.1
C9orf47-201ENST00000334490 OR2AJ1Q8NGZ0 328 aa14.44□□□□□ -0.1
C9orf47-201ENST00000334490 DAZLQ92904 295 aaKnown RBP14.44□□□□□ -0.1
C9orf47-201ENST00000334490 RTP3Q9BQQ7 232 aa14.44□□□□□ -0.1
C9orf47-201ENST00000334490 STOX2Q9P2F5 926 aaPredicted RBP14.44□□□□□ -0.1
C9orf47-201ENST00000334490 NFKBIL1Q9UBC1 381 aaPredicted RBP14.44□□□□□ -0.1
C9orf47-201ENST00000334490 BTBD3Q9Y2F9 522 aa14.44□□□□□ -0.1
C9orf47-201ENST00000334490 NUMA1Q14980 2115 aa14.44□□□□□ -0.1
C9orf47-201ENST00000334490 C1orf226A1L170 272 aa14.44□□□□□ -0.1
C9orf47-201ENST00000334490 FAM189A1O60320 539 aa14.44□□□□□ -0.1
C9orf47-201ENST00000334490 DIRAS1O95057 198 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms