RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 CMPK1P30085 196 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 ALDH3A2P51648 485 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 SIGLEC14Q08ET2 396 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 NFATC3Q12968 1075 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 TMEM52BQ4KMG9 183 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 TSSK4Q6SA08 328 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 ZNF534Q76KX8 674 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 HDDC2Q7Z4H3 204 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.37□□□□□ -0.59
HDAC6-201ENST00000334136 LILRA2Q8N149 483 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 FRS2Q8WU20 508 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 DIRAS2Q96HU8 199 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 AIF1LQ9BQI0 150 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 EBPLQ9BY08 206 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 SLC9A8Q9Y2E8 581 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 LYVE1Q9Y5Y7 322 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 CROCCQ5TZA2 2017 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 VILLO15195 856 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 BCAT2O15382 392 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-201ENST00000334136 SDC3O75056 442 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 G6PDP11413 515 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 LHCGRP22888 699 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 NANOGP8Q6NSW7 305 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 PGM2L1Q6PCE3 622 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 ZNF765Q7L2R6 523 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 PIWIL3Q7Z3Z3 882 aaKnown RBP11.36□□□□□ -0.59
HDAC6-201ENST00000334136 RABEPKQ7Z6M1 372 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 AURKBQ96GD4 344 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-201ENST00000334136 GUCD1Q96NT3 240 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 NANOGQ9H9S0 305 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 SACM1LQ9NTJ5 587 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 GSTK1Q9Y2Q3 226 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 CEPT1Q9Y6K0 416 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 MAP1BP46821 2468 aaKnown RBP11.36□□□□□ -0.59
HDAC6-201ENST00000334136 C7orf72A4D263 438 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 HAT1O14929 419 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 GREM1O60565 184 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 SCELO95171 688 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 BMP10O95393 424 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 FABP3P05413 133 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 GABRG2P18507 467 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 PHC1P78364 1004 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 GTF2H2Q13888 395 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 SEMA3AQ14563 771 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 TBC1D25Q3MII6 688 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 GTF2H2CQ6P1K8 395 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 SLC9B2Q86UD5 537 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 GPR135Q8IZ08 494 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 EDAQ92838 391 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 PYCR2Q96C36 320 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 MALT1Q9UDY8 824 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 SSR3Q9UNL2 185 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 OR5K4A6NMS3 321 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 CTSLP07711 333 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 HSD17B2P37059 387 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 CSNK1EP49674 416 aaKnown RBP11.36□□□□□ -0.59
HDAC6-201ENST00000334136 AGTR2P50052 363 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 ZP2Q05996 745 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 ANKDD1AQ495B1 522 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 ZNF789Q5FWF6 425 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 RBM48Q5RL73 367 aaKnown RBP11.36□□□□□ -0.59
HDAC6-201ENST00000334136 DCP2Q8IU60 420 aaKnown RBP11.36□□□□□ -0.59
HDAC6-201ENST00000334136 ARMC8Q8IUR7 673 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 CNIH3Q8TBE1 160 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 SLC45A3Q96JT2 553 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 WDR83Q9BRX9 315 aaKnown RBP11.36□□□□□ -0.59
HDAC6-201ENST00000334136 C6orf106Q9H6K1 298 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-201ENST00000334136 RIMS3Q9UJD0 308 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 PCDHGA7Q9Y5G6 932 aa11.36□□□□□ -0.59
HDAC6-201ENST00000334136 MROH6A6NGR9 719 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 BHMG1C9JSJ3 638 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-201ENST00000334136 K7EQS6 105 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 TNFRSF11BO00300 401 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 NME4O00746 187 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 ZNF8P17098 575 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-201ENST00000334136 ZNF10P21506 573 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-201ENST00000334136 GDF5P43026 501 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 GSTM5P46439 218 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 BDKRB1P46663 353 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 CDH12P55289 794 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 OLR1P78380 273 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 NFE2L1Q14494 772 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 TIGD6Q17RP2 521 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 TMPRSS11AQ6ZMR5 421 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 DCUN1D3Q8IWE4 304 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 OR4E2Q8NGC2 313 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 SLC22A18Q96BI1 424 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 MAGEB10Q96LZ2 347 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-201ENST00000334136 BIRC8Q96P09 236 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 ENOPH1Q9UHY7 261 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 ZNF222Q9UK12 451 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 VWA8A3KMH1 1905 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 MYO16Q9Y6X6 1858 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 H3BMQ9 156 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 NRG2O14511 850 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-201ENST00000334136 IL6P05231 212 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 IFI30P13284 250 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 SLC6A2P23975 617 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 HPCAL1P37235 193 aa11.35□□□□□ -0.59
HDAC6-201ENST00000334136 OR2B6P58173 313 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms