RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 ESR1P03372 595 aa17.48■□□□□ 0.39
PKP3-201ENST00000331563 PSPHP78330 225 aa17.48■□□□□ 0.39
PKP3-201ENST00000331563 FAM189BP81408 668 aa17.48■□□□□ 0.39
PKP3-201ENST00000331563 RIN1Q13671 783 aa17.48■□□□□ 0.39
PKP3-201ENST00000331563 ZMYND11Q15326 602 aa17.48■□□□□ 0.39
PKP3-201ENST00000331563 GLCCI1Q86VQ1 547 aa17.48■□□□□ 0.39
PKP3-201ENST00000331563 TSSK3Q96PN8 268 aa17.48■□□□□ 0.39
PKP3-201ENST00000331563 RAD9AQ99638 391 aa17.48■□□□□ 0.39
PKP3-201ENST00000331563 KCNH6Q9H252 994 aa17.48■□□□□ 0.39
PKP3-201ENST00000331563 ABCB9Q9NP78 766 aa17.48■□□□□ 0.39
PKP3-201ENST00000331563 ALG5Q9Y673 324 aa17.48■□□□□ 0.39
PKP3-201ENST00000331563 CLCA3PQ9Y6N3 262 aa17.48■□□□□ 0.39
PKP3-201ENST00000331563 TRAV19A0A0A6YYK7 116 aa17.47■□□□□ 0.39
PKP3-201ENST00000331563 A0A1W2PQH9 124 aa17.47■□□□□ 0.39
PKP3-201ENST00000331563 IRAK2O43187 625 aa17.47■□□□□ 0.39
PKP3-201ENST00000331563 CSF3P09919 207 aa17.47■□□□□ 0.39
PKP3-201ENST00000331563 RPS3P23396 243 aaKnown RBP eCLIP17.47■□□□□ 0.392e-6■■■□□ 17.7
PKP3-201ENST00000331563 KDELR2P33947 212 aa17.47■□□□□ 0.39
PKP3-201ENST00000331563 SOX3P41225 446 aa17.47■□□□□ 0.39
PKP3-201ENST00000331563 USP39Q53GS9 565 aaKnown RBP17.47■□□□□ 0.39
PKP3-201ENST00000331563 TYW3Q6IPR3 259 aaKnown RBP17.47■□□□□ 0.39
PKP3-201ENST00000331563 KLHL17Q6TDP4 642 aa17.47■□□□□ 0.39
PKP3-201ENST00000331563 EIF3MQ7L2H7 374 aaKnown RBP17.47■□□□□ 0.39
PKP3-201ENST00000331563 SCD5Q86SK9 330 aa17.47■□□□□ 0.39
PKP3-201ENST00000331563 LPCAT1Q8NF37 534 aa17.47■□□□□ 0.39
PKP3-201ENST00000331563 OR4K2Q8NGD2 314 aa17.47■□□□□ 0.39
PKP3-201ENST00000331563 DNAJA4Q8WW22 397 aaPredicted RBP17.47■□□□□ 0.39
PKP3-201ENST00000331563 TRMT61AQ96FX7 289 aaKnown RBP17.47■□□□□ 0.39
PKP3-201ENST00000331563 CCM2Q9BSQ5 444 aa17.47■□□□□ 0.39
PKP3-201ENST00000331563 TRBV5-3A0A0A0MS03 114 aa17.47■□□□□ 0.39
PKP3-201ENST00000331563 MOXD2PA6NHM9 499 aa17.47■□□□□ 0.39
PKP3-201ENST00000331563 PEX11BO96011 259 aa17.47■□□□□ 0.39
PKP3-201ENST00000331563 AQP1P29972 269 aa17.47■□□□□ 0.39
PKP3-201ENST00000331563 LIMK1P53667 647 aa17.47■□□□□ 0.39
PKP3-201ENST00000331563 METTL3Q86U44 580 aaKnown RBP17.47■□□□□ 0.39
PKP3-201ENST00000331563 ZBTB44Q8NCP5 570 aa17.47■□□□□ 0.39
PKP3-201ENST00000331563 DPH2Q9BQC3 489 aaPredicted RBP17.47■□□□□ 0.39
PKP3-201ENST00000331563 TNPO3Q9Y5L0 923 aaKnown RBP17.47■□□□□ 0.39
PKP3-201ENST00000331563 C1QCP02747 245 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 PKMP14618 531 aaKnown RBP17.46■□□□□ 0.39
PKP3-201ENST00000331563 HLA-DMAP28067 261 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 EVI2BP34910 448 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 HMGCLP35914 325 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 ITGA1P56199 1179 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 GPR85P60893 370 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 RGS1Q08116 209 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 TAF12Q16514 161 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 DEFB128Q7Z7B8 93 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 ATCAYQ86WG3 371 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 NLGN4YQ8NFZ3 816 aaPredicted RBP17.46■□□□□ 0.39
PKP3-201ENST00000331563 BCL7CQ8WUZ0 217 aaPredicted RBP17.46■□□□□ 0.39
PKP3-201ENST00000331563 ULK4Q96C45 1275 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 EGFL8Q99944 293 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 GTPBP2Q9BX10 602 aaKnown RBP17.46■□□□□ 0.39
PKP3-201ENST00000331563 GABARAPL3Q9BY60 117 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 CPNE7Q9UBL6 633 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 TLR6Q9Y2C9 796 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 A0A1W2PRG6 482 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 IQCF5A8MTL0 148 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 SLC28A1O00337 649 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 TSPAN12O95859 305 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 BCKDHAP12694 445 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 GDF5P43026 501 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 ACVR1Q04771 509 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.46■□□□□ 0.39
PKP3-201ENST00000331563 DSC1Q08554 894 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 EIF4HQ15056 248 aaKnown RBP17.46■□□□□ 0.39
PKP3-201ENST00000331563 SSX1Q16384 188 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 SAXO2Q658L1 398 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 RSPO2Q6UXX9 243 aaPredicted RBP17.46■□□□□ 0.39
PKP3-201ENST00000331563 TAS1R1Q7RTX1 841 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 ZNF551Q7Z340 670 aaPredicted RBP17.46■□□□□ 0.39
PKP3-201ENST00000331563 TMCO2Q7Z6W1 182 aaPredicted RBP17.46■□□□□ 0.39
PKP3-201ENST00000331563 RGL4Q8IZJ4 473 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 C19orf18Q8NEA5 215 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 DEFB118Q96PH6 123 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 MCUBQ9NWR8 336 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 HS3ST4Q9Y661 456 aa17.46■□□□□ 0.39
PKP3-201ENST00000331563 LOC285095A0A1B0GVY8 99 aa17.45■□□□□ 0.38
PKP3-201ENST00000331563 SCAMP3O14828 347 aaKnown RBP17.45■□□□□ 0.38
PKP3-201ENST00000331563 PAHP00439 452 aa17.45■□□□□ 0.38
PKP3-201ENST00000331563 FGF1P05230 155 aa17.45■□□□□ 0.38
PKP3-201ENST00000331563 POU2F1P14859 743 aa17.45■□□□□ 0.38
PKP3-201ENST00000331563 ALAS2P22557 587 aa17.45■□□□□ 0.38
PKP3-201ENST00000331563 CPN2P22792 545 aa17.45■□□□□ 0.38
PKP3-201ENST00000331563 GPC1P35052 558 aa17.45■□□□□ 0.38
PKP3-201ENST00000331563 POLR2GP62487 172 aaKnown RBP eCLIP17.45■□□□□ 0.38
PKP3-201ENST00000331563 VMACQ2NL98 169 aa17.45■□□□□ 0.38
PKP3-201ENST00000331563 C16orf62Q7Z3J2 963 aa17.45■□□□□ 0.38
PKP3-201ENST00000331563 TMC8Q8IU68 726 aa17.45■□□□□ 0.38
PKP3-201ENST00000331563 C9orf43Q8TAL5 461 aaPredicted RBP17.45■□□□□ 0.38
PKP3-201ENST00000331563 SPATA9Q9BWV2 254 aa17.45■□□□□ 0.38
PKP3-201ENST00000331563 CRISPLD1Q9H336 500 aa17.45■□□□□ 0.38
PKP3-201ENST00000331563 NSUN3Q9H649 340 aaKnown RBP17.45■□□□□ 0.38
PKP3-201ENST00000331563 ZNF226Q9NYT6 803 aa17.45■□□□□ 0.38
PKP3-201ENST00000331563 GPRC5BQ9NZH0 403 aa17.45■□□□□ 0.38
PKP3-201ENST00000331563 TNFRSF11BO00300 401 aa17.45■□□□□ 0.38
PKP3-201ENST00000331563 TNFRSF10BO14763 440 aa17.45■□□□□ 0.38
PKP3-201ENST00000331563 PPM1BO75688 479 aa17.45■□□□□ 0.38
PKP3-201ENST00000331563 HMBSP08397 361 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms