RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 ERAP2Q6P179 960 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 CACTIN-AS1Q8N1I8 211 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 TRMT61AQ96FX7 289 aaKnown RBP13.88□□□□□ -0.19
SNX20-202ENST00000330943 VPS35Q96QK1 796 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 CITED4Q96RK1 184 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 IL4I1Q96RQ9 567 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 ATG10Q9H0Y0 220 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 CNOT2Q9NZN8 540 aaKnown RBP13.88□□□□□ -0.19
SNX20-202ENST00000330943 SZT2Q5T011 3432 aa13.88□□□□□ -0.19
SNX20-202ENST00000330943 PRAMEF25A6NGN4 478 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 EIF3FO00303 357 aaPredicted RBP13.87□□□□□ -0.19
SNX20-202ENST00000330943 PRMT3O60678 531 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 KLKB1P03952 638 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 ETFAP13804 333 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 MYL9P24844 172 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 CNR2P34972 360 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 HSPA14Q0VDF9 509 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 TEAD4Q15561 434 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 CXorf57Q6NSI4 855 aaKnown RBP13.87□□□□□ -0.19
SNX20-202ENST00000330943 PIH1D2Q8WWB5 315 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 CLIP3Q96DZ5 547 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 RIPOR3Q96MK2 946 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 SPATA9Q9BWV2 254 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 CARD8Q9Y2G2 431 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 SLC45A1Q9Y2W3 748 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 CMAHPQ9Y471 501 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 C1orf226A1L170 272 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 OR6C70A6NIJ9 312 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 WWP2O00308 870 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 CRYZL1O95825 349 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 SCG5P05408 212 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 HIST1H2AGP0C0S8 130 aaPredicted RBP13.87□□□□□ -0.19
SNX20-202ENST00000330943 HIST1H2ADP20671 130 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 CORO1AP31146 461 aaKnown RBP13.87□□□□□ -0.19
SNX20-202ENST00000330943 P2RX3P56373 397 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 ACSM2AQ08AH3 577 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 CEP78Q5JTW2 689 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 COX20Q5RI15 118 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 ACSM2BQ68CK6 577 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 GLB1LQ6UWU2 654 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 SLC34A3Q8N130 599 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 SUN5Q8TC36 379 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 HIST1H2AHQ96KK5 128 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 HIST1H2AJQ99878 128 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 H2AFJQ9BTM1 129 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 C11orf54Q9H0W9 315 aaPredicted RBP13.87□□□□□ -0.19
SNX20-202ENST00000330943 GKN1Q9NS71 199 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 VPS29Q9UBQ0 182 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 CLEC2DQ9UHP7 191 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 A0A0B4J293 547 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 TRBV5-4A0A0C4DH59 114 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 MTMR11A4FU01 709 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 SH3D21A4FU49 640 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 SCAMP2O15127 329 aaKnown RBP13.87□□□□□ -0.19
SNX20-202ENST00000330943 PSMA1P25786 263 aaKnown RBP13.87□□□□□ -0.19
SNX20-202ENST00000330943 PTX3P26022 381 aaPredicted RBP13.87□□□□□ -0.19
SNX20-202ENST00000330943 GKP32189 559 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 CCR7P32248 378 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 DUSP4Q13115 394 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 HKDC1Q2TB90 917 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 DGKKQ5KSL6 1271 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 CPTPQ5TA50 214 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 ARMCX6Q7L4S7 300 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 SLC44A2Q8IWA5 706 aaPredicted RBP13.87□□□□□ -0.19
SNX20-202ENST00000330943 NPAS3Q8IXF0 933 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 NXPE1Q8N323 547 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 CAMKK1Q8N5S9 505 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 AQP11Q8NBQ7 271 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 CHTF18Q8WVB6 975 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 RNF31Q96EP0 1072 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 C11orf16Q9NQ32 467 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 ACOXLQ9NUZ1 547 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 CORO2BQ9UQ03 480 aa13.87□□□□□ -0.19
SNX20-202ENST00000330943 GABRR3A8MPY1 467 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 B4DXG7 233 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 K7ERQ8 282 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 CYP17A1P05093 508 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 ZDHHC11BP0C7U3 371 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 ATF6P18850 670 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 HOXC5Q00444 222 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 SIGIRRQ6IA17 410 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 SYCE2Q6PIF2 218 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 ZNF852Q6ZMS4 543 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 VWA5B2Q8N398 1253 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 OR4A15Q8NGL6 344 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 MED30Q96HR3 178 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 FCRL1Q96LA6 429 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 FRMD6Q96NE9 622 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 ABCB9Q9NP78 766 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 DNAJC11Q9NVH1 559 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 RHCGQ9UBD6 479 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 A0A0G2JMP0 313 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 ICMTO60725 284 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 ENTPD6O75354 484 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 PPIBP23284 216 aaKnown RBP13.86□□□□□ -0.19
SNX20-202ENST00000330943 CHMP24386 653 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 SLC6A12P48065 614 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 FLT3LGP49771 235 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 IRF8Q02556 426 aa13.86□□□□□ -0.19
SNX20-202ENST00000330943 ASAH1Q13510 395 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms