RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 TRAM1L1Q8N609 369 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 OR4K1Q8NGD4 311 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 OR2A12Q8NGT7 310 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 PKP4Q99569 1192 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 BHLHE41Q9C0J9 482 aaPredicted RBP14.75□□□□□ -0.05
BRCC3-201ENST00000330045 ZBP1Q9H171 429 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 FKBP14Q9NWM8 211 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 EXO1Q9UQ84 846 aaKnown RBP14.75□□□□□ -0.05
BRCC3-201ENST00000330045 POFUT2Q9Y2G5 429 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 WDR37Q9Y2I8 494 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 PCDHGA2Q9Y5H1 932 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 METTL15A6NJ78 407 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 HIDE1A8MVS5 230 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 PTX3P26022 381 aaPredicted RBP14.75□□□□□ -0.05
BRCC3-201ENST00000330045 RECQLP46063 649 aaPredicted RBP14.75□□□□□ -0.05
BRCC3-201ENST00000330045 CDH12P55289 794 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 ERVFC1P60507 584 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 HBA1P69905 142 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 USP43Q70EL4 1123 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 ZNF605Q86T29 641 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 TMEM25Q86YD3 366 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 LACC1Q8IV20 430 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 OR4C15Q8NGM1 316 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 ZNF675Q8TD23 568 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 HPS1Q92902 700 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 CXorf40BQ96DE9 158 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 RAD18Q9NS91 495 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 SCHIP1Q9P0W5 487 aaPredicted RBP14.75□□□□□ -0.05
BRCC3-201ENST00000330045 KCNE2Q9Y6J6 123 aa14.75□□□□□ -0.05
BRCC3-201ENST00000330045 SPTBN5Q9NRC6 3674 aaKnown RBP14.74□□□□□ -0.05
BRCC3-201ENST00000330045 TNFRSF21O75509 655 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 UPK1BO75841 260 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 NUDT6P53370 316 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 CTSCP53634 463 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 MICAQ29983 383 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 HENMT1Q5T8I9 393 aaKnown RBP14.74□□□□□ -0.05
BRCC3-201ENST00000330045 MED27Q6P2C8 311 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 SLC46A3Q7Z3Q1 461 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 GOT1L1Q8NHS2 421 aaPredicted RBP14.74□□□□□ -0.05
BRCC3-201ENST00000330045 NEIL2Q969S2 332 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 ERLEC1Q96DZ1 483 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 NIPSNAP1Q9BPW8 284 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 FAM83CQ9BQN1 747 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 SLC35A5Q9BS91 424 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 ZSCAN5AQ9BUG6 496 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 TMEM106CQ9BVX2 250 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 SLC46A2Q9BY10 475 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 REEP4Q9H6H4 257 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 PRDM8Q9NQV8 689 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 ABCB10Q9NRK6 738 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 ATP6V1HQ9UI12 483 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 ZNF229Q9UJW7 825 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 MAFFQ9ULX9 164 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 ALPK3Q96L96 1907 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 ISPDA4D126 451 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 WASH3PC4AMC7 463 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 TAF4O00268 1085 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 NPC1O15118 1278 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 ATG13O75143 517 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 RPLP0P05388 317 aaKnown RBP14.74□□□□□ -0.05
BRCC3-201ENST00000330045 STSP08842 583 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 CTSAP10619 480 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 PABPC1P11940 636 aaKnown RBP14.74□□□□□ -0.05
BRCC3-201ENST00000330045 ZNF8P17098 575 aaPredicted RBP14.74□□□□□ -0.05
BRCC3-201ENST00000330045 SCARB2Q14108 478 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 EXOC3L2Q2M3D2 409 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 GCNT6Q5T4J0 391 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 TUBA3EQ6PEY2 450 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 TMPRSS11BQ86T26 416 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 ARMC8Q8IUR7 673 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 LGI4Q8N135 537 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 DEPDC4Q8N2C3 294 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 STX19Q8N4C7 294 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 RASGEF1AQ8N9B8 481 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 OR52N2Q8NGI0 321 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 UTP15Q8TED0 518 aaKnown RBP14.74□□□□□ -0.05
BRCC3-201ENST00000330045 BTN2A2Q8WVV5 523 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 FOPNLQ96NB1 174 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 C6orf62Q9GZU0 229 aaPredicted RBP14.74□□□□□ -0.05
BRCC3-201ENST00000330045 GPR83Q9NYM4 423 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 ZNF226Q9NYT6 803 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 PLXNA2O75051 1894 aa14.74□□□□□ -0.05
BRCC3-201ENST00000330045 MYOFQ9NZM1 2061 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 SLC5A10A0PJK1 596 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 AGAP5A6NIR3 686 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 NEDD8-MDP1E9PL57 170 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 ZNF197O14709 1029 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 C6orf47O95873 294 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 FGBP02675 491 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 LRG1P02750 347 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 DBTP11182 482 aaKnown RBP14.73□□□□□ -0.05
BRCC3-201ENST00000330045 MYOGP15173 224 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 ITGA2P17301 1181 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 MAGEA10P43363 369 aaPredicted RBP14.73□□□□□ -0.05
BRCC3-201ENST00000330045 PRIM2P49643 509 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 RBBP4Q09028 425 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 ZNF763Q0D2J5 394 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 COLEC12Q5KU26 742 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 SLCO4C1Q6ZQN7 724 aa14.73□□□□□ -0.05
BRCC3-201ENST00000330045 LYSMD2Q8IV50 215 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms