RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 TBCCQ15814 346 aa26.04■■□□□ 1.76
ATPAF1-201ENST00000329231 HIST2H2ACQ16777 129 aaPredicted RBP26.04■■□□□ 1.76
ATPAF1-201ENST00000329231 CRB2Q5IJ48 1285 aa26.04■■□□□ 1.76
ATPAF1-201ENST00000329231 PRAMEF9Q5VWM5 478 aa26.04■■□□□ 1.76
ATPAF1-201ENST00000329231 HIST2H2AA3Q6FI13 130 aa26.04■■□□□ 1.76
ATPAF1-201ENST00000329231 Q6ZS92 163 aa26.04■■□□□ 1.76
ATPAF1-201ENST00000329231 LANCL3Q6ZV70 420 aa26.04■■□□□ 1.76
ATPAF1-201ENST00000329231 PPP4R1Q8TF05 950 aa26.04■■□□□ 1.76
ATPAF1-201ENST00000329231 GAL3ST3Q96A11 431 aa26.04■■□□□ 1.76
ATPAF1-201ENST00000329231 FAR2Q96K12 515 aa26.04■■□□□ 1.76
ATPAF1-201ENST00000329231 WDR77Q9BQA1 342 aaPredicted RBP26.04■■□□□ 1.76
ATPAF1-201ENST00000329231 RBCK1Q9BYM8 510 aa26.04■■□□□ 1.76
ATPAF1-201ENST00000329231 VPS11Q9H270 941 aa26.04■■□□□ 1.76
ATPAF1-201ENST00000329231 LANCL2Q9NS86 450 aa26.04■■□□□ 1.76
ATPAF1-201ENST00000329231 ASB1Q9Y576 335 aa26.04■■□□□ 1.76
ATPAF1-201ENST00000329231 DOCK10Q96BY6 2186 aa26.04■■□□□ 1.76
ATPAF1-201ENST00000329231 OR2W5A6NFC9 320 aa26.03■■□□□ 1.76
ATPAF1-201ENST00000329231 POC1B-GALNT4F8VUJ3 575 aa26.03■■□□□ 1.76
ATPAF1-201ENST00000329231 K7EPI3 171 aa26.03■■□□□ 1.76
ATPAF1-201ENST00000329231 WFS1O76024 890 aa26.03■■□□□ 1.76
ATPAF1-201ENST00000329231 ZIC2O95409 532 aaPredicted RBP26.03■■□□□ 1.76
ATPAF1-201ENST00000329231 MTHFD2P13995 350 aa26.03■■□□□ 1.76
ATPAF1-201ENST00000329231 CNTFP26441 200 aa26.03■■□□□ 1.76
ATPAF1-201ENST00000329231 RHAGQ02094 409 aa26.03■■□□□ 1.76
ATPAF1-201ENST00000329231 CHIT1Q13231 466 aa26.03■■□□□ 1.76
ATPAF1-201ENST00000329231 MFAP5Q13361 173 aa26.03■■□□□ 1.76
ATPAF1-201ENST00000329231 ABRAXAS2Q15018 415 aa26.03■■□□□ 1.76
ATPAF1-201ENST00000329231 INPP5JQ15735 1006 aaPredicted RBP26.03■■□□□ 1.76
ATPAF1-201ENST00000329231 NSDHLQ15738 373 aa26.03■■□□□ 1.76
ATPAF1-201ENST00000329231 ANKRD37Q7Z713 158 aa26.03■■□□□ 1.76
ATPAF1-201ENST00000329231 IQCKQ8N0W5 287 aa26.03■■□□□ 1.76
ATPAF1-201ENST00000329231 BRIX1Q8TDN6 353 aaKnown RBP26.03■■□□□ 1.76
ATPAF1-201ENST00000329231 ISL2Q96A47 359 aa26.03■■□□□ 1.76
ATPAF1-201ENST00000329231 IMMP1LQ96LU5 166 aa26.03■■□□□ 1.76
ATPAF1-201ENST00000329231 ZNF180Q9UJW8 692 aa26.03■■□□□ 1.76
ATPAF1-201ENST00000329231 LRIT2A6NDA9 550 aa26.02■■□□□ 1.76
ATPAF1-201ENST00000329231 MAGEB17A8MXT2 336 aa26.02■■□□□ 1.76
ATPAF1-201ENST00000329231 DNAJB6O75190 326 aa26.02■■□□□ 1.76
ATPAF1-201ENST00000329231 RNH1P13489 461 aaKnown RBP26.02■■□□□ 1.76
ATPAF1-201ENST00000329231 GFAPP14136 432 aa26.02■■□□□ 1.76
ATPAF1-201ENST00000329231 EPORP19235 508 aa26.02■■□□□ 1.76
ATPAF1-201ENST00000329231 CASP2P42575 452 aa26.02■■□□□ 1.76
ATPAF1-201ENST00000329231 LINC00696Q6ZRV3 163 aa26.02■■□□□ 1.76
ATPAF1-201ENST00000329231 EIF1ADQ8N9N8 165 aaKnown RBP26.02■■□□□ 1.76
ATPAF1-201ENST00000329231 UHMK1Q8TAS1 419 aaKnown RBP26.02■■□□□ 1.76
ATPAF1-201ENST00000329231 MS4A6EQ96DS6 147 aa26.02■■□□□ 1.76
ATPAF1-201ENST00000329231 GPR78Q96P69 363 aa26.02■■□□□ 1.76
ATPAF1-201ENST00000329231 AICDAQ9GZX7 198 aa26.02■■□□□ 1.76
ATPAF1-201ENST00000329231 ZNF490Q9ULM2 529 aaPredicted RBP26.02■■□□□ 1.76
ATPAF1-201ENST00000329231 A0A088AWK7 358 aa26.01■■□□□ 1.75
ATPAF1-201ENST00000329231 IGHV3-20A0A0C4DH32 117 aa26.01■■□□□ 1.75
ATPAF1-201ENST00000329231 NBASA2RRP1 2371 aa26.01■■□□□ 1.75
ATPAF1-201ENST00000329231 PSMD12O00232 456 aaPredicted RBP26.01■■□□□ 1.75
ATPAF1-201ENST00000329231 ERI3O43414 337 aaKnown RBP26.01■■□□□ 1.75
ATPAF1-201ENST00000329231 VPS4BO75351 444 aa26.01■■□□□ 1.75
ATPAF1-201ENST00000329231 SEC24DO94855 1032 aaPredicted RBP26.01■■□□□ 1.75
ATPAF1-201ENST00000329231 UQCRHP07919 91 aa26.01■■□□□ 1.75
ATPAF1-201ENST00000329231 EPB42P16452 691 aa26.01■■□□□ 1.75
ATPAF1-201ENST00000329231 CD22P20273 847 aa26.01■■□□□ 1.75
ATPAF1-201ENST00000329231 ZNF10P21506 573 aaPredicted RBP26.01■■□□□ 1.75
ATPAF1-201ENST00000329231 HNRNPH1P31943 449 aaKnown RBP26.01■■□□□ 1.75
ATPAF1-201ENST00000329231 MAGEA12P43365 314 aa26.01■■□□□ 1.75
ATPAF1-201ENST00000329231 BTN3A2P78410 334 aa26.01■■□□□ 1.75
ATPAF1-201ENST00000329231 TRMT10CQ7L0Y3 403 aaKnown RBP26.01■■□□□ 1.75
ATPAF1-201ENST00000329231 DNAJB14Q8TBM8 379 aa26.01■■□□□ 1.75
ATPAF1-201ENST00000329231 PSMF1Q92530 271 aa26.01■■□□□ 1.75
ATPAF1-201ENST00000329231 UBE2E3Q969T4 207 aa26.01■■□□□ 1.75
ATPAF1-201ENST00000329231 RHBGQ9H310 441 aa26.01■■□□□ 1.75
ATPAF1-201ENST00000329231 PTGFRNQ9P2B2 879 aa26.01■■□□□ 1.75
ATPAF1-201ENST00000329231 VPS4AQ9UN37 437 aa26.01■■□□□ 1.75
ATPAF1-201ENST00000329231 C4orf51C9J302 202 aa26■■□□□ 1.75
ATPAF1-201ENST00000329231 B4GALT2O60909 372 aa26■■□□□ 1.75
ATPAF1-201ENST00000329231 CELA2AP08217 269 aa26■■□□□ 1.75
ATPAF1-201ENST00000329231 ABHD2P08910 425 aa26■■□□□ 1.75
ATPAF1-201ENST00000329231 ALDH18A1P54886 795 aaKnown RBP26■■□□□ 1.75
ATPAF1-201ENST00000329231 ACTN3Q08043 901 aaPredicted RBP26■■□□□ 1.75
ATPAF1-201ENST00000329231 PCDH1Q08174 1060 aa26■■□□□ 1.75
ATPAF1-201ENST00000329231 E2F2Q14209 437 aa26■■□□□ 1.75
ATPAF1-201ENST00000329231 SETDB1Q15047 1291 aa26■■□□□ 1.75
ATPAF1-201ENST00000329231 PFKFB4Q16877 469 aa26■■□□□ 1.75
ATPAF1-201ENST00000329231 PLAG1Q6DJT9 500 aa26■■□□□ 1.75
ATPAF1-201ENST00000329231 VN1R5Q7Z5H4 357 aa26■■□□□ 1.75
ATPAF1-201ENST00000329231 SIRT6Q8N6T7 355 aa26■■□□□ 1.75
ATPAF1-201ENST00000329231 DCAKDQ8WVC6 231 aa26■■□□□ 1.75
ATPAF1-201ENST00000329231 REXO4Q9GZR2 422 aaKnown RBP26■■□□□ 1.75
ATPAF1-201ENST00000329231 ANGPTL3Q9Y5C1 460 aa26■■□□□ 1.75
ATPAF1-201ENST00000329231 EXOC1LA0A1B0GW35 172 aa25.99■■□□□ 1.75
ATPAF1-201ENST00000329231 KLK8O60259 260 aa25.99■■□□□ 1.75
ATPAF1-201ENST00000329231 PRMT3O60678 531 aa25.99■■□□□ 1.75
ATPAF1-201ENST00000329231 FAM153BP0C7A2 387 aa25.99■■□□□ 1.75
ATPAF1-201ENST00000329231 ITGAMP11215 1152 aa25.99■■□□□ 1.75
ATPAF1-201ENST00000329231 SOX11P35716 441 aa25.99■■□□□ 1.75
ATPAF1-201ENST00000329231 TGM3Q08188 693 aa25.99■■□□□ 1.75
ATPAF1-201ENST00000329231 NAA30Q147X3 362 aaPredicted RBP25.99■■□□□ 1.75
ATPAF1-201ENST00000329231 BTBD16Q32M84 506 aa25.99■■□□□ 1.75
ATPAF1-201ENST00000329231 ADPRMQ3LIE5 342 aa25.99■■□□□ 1.75
ATPAF1-201ENST00000329231 FAM153CQ494X1 144 aa25.99■■□□□ 1.75
ATPAF1-201ENST00000329231 SFT2D3Q587I9 215 aa25.99■■□□□ 1.75
ATPAF1-201ENST00000329231 TRIM40Q6P9F5 258 aa25.99■■□□□ 1.75
ATPAF1-201ENST00000329231 QSOX2Q6ZRP7 698 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms