RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 RNF175Q8N4F7 328 aa17.92■□□□□ 0.46
EXOSC3-201ENST00000327304 HIPK4Q8NE63 616 aa17.92■□□□□ 0.46
EXOSC3-201ENST00000327304 BHLHE22Q8NFJ8 381 aaPredicted RBP17.92■□□□□ 0.46
EXOSC3-201ENST00000327304 IFI44Q8TCB0 444 aa17.92■□□□□ 0.46
EXOSC3-201ENST00000327304 TGM7Q96PF1 710 aa17.92■□□□□ 0.46
EXOSC3-201ENST00000327304 EPB41L1Q9H4G0 881 aa17.92■□□□□ 0.46
EXOSC3-201ENST00000327304 SNX7Q9UNH6 387 aa17.92■□□□□ 0.46
EXOSC3-201ENST00000327304 DLGAP4Q9Y2H0 992 aa17.92■□□□□ 0.46
EXOSC3-201ENST00000327304 FOXE1O00358 373 aaPredicted RBP17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 TNFSF14O43557 240 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 KIF1CO43896 1103 aaKnown RBP17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 PCNAP12004 261 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 SDC1P18827 310 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 TCN1P20061 433 aaPredicted RBP17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 MSX2P35548 267 aaPredicted RBP17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 SESN3P58005 492 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 SLC2A7Q6PXP3 512 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 FIGLAQ6QHK4 219 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 DHDDSQ86SQ9 333 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 NAXDQ8IW45 347 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 KRT78Q8N1N4 520 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 DNAJB8Q8NHS0 232 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 SLC13A3Q8WWT9 602 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 UBE2E3Q969T4 207 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 TMEM125Q96AQ2 219 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 MTERF1Q99551 399 aaKnown RBP17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 RAB33BQ9H082 229 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 CMTM6Q9NX76 183 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 EPHA6Q9UF33 1036 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 RUVBL1Q9Y265 456 aaKnown RBP17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 C15orf41Q9Y2V0 281 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 OR2A25A4D2G3 310 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 PROB1E7EW31 1015 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 PRMT3O60678 531 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 FKBP9O95302 570 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 PGRP06401 933 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 ST6GAL1P15907 406 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 CDH3P22223 829 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 HRH2P25021 359 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 DUSP3P51452 185 aaPredicted RBP17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 CCL7P80098 99 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 BNIP2Q12982 314 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 PWP1Q13610 501 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 DDX39BQ13838 428 aaKnown RBP17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 CAPRIN1Q14444 709 aaKnown RBP17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 RBBP5Q15291 538 aaKnown RBP17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 ZIC1Q15915 447 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 TMIGD1Q6UXZ0 262 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 DLEU7Q6UYE1 221 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 FAM156AQ8NDB6 213 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 HUS1BQ8NHY5 278 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 TESCQ96BS2 214 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 C11orf24Q96F05 449 aaPredicted RBP17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 MAP3K3Q99759 626 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 SEMA6CQ9H3T2 930 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 SYNPO2LQ9H987 977 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 NMRK1Q9NWW6 199 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 TMEM9Q9P0T7 183 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 FTSJ1Q9UET6 329 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 KLK4Q9Y5K2 254 aa17.91■□□□□ 0.46
EXOSC3-201ENST00000327304 COL5A1P20908 1838 aaPredicted RBP17.9■□□□□ 0.46
EXOSC3-201ENST00000327304 MAGEB17A8MXT2 336 aa17.9■□□□□ 0.46
EXOSC3-201ENST00000327304 H3BNX3 289 aa17.9■□□□□ 0.46
EXOSC3-201ENST00000327304 ZW10O43264 779 aa17.9■□□□□ 0.46
EXOSC3-201ENST00000327304 LCMT2O60294 686 aaKnown RBP17.9■□□□□ 0.46
EXOSC3-201ENST00000327304 STAMBPO95630 424 aa17.9■□□□□ 0.46
EXOSC3-201ENST00000327304 BAG2O95816 211 aa17.9■□□□□ 0.46
EXOSC3-201ENST00000327304 CKMT2P17540 419 aa17.9■□□□□ 0.46
EXOSC3-201ENST00000327304 CXCR2P25025 360 aa17.9■□□□□ 0.46
EXOSC3-201ENST00000327304 BCL6P41182 706 aa17.9■□□□□ 0.46
EXOSC3-201ENST00000327304 DGKQP52824 942 aa17.9■□□□□ 0.46
EXOSC3-201ENST00000327304 EEFSECP57772 596 aaKnown RBP17.9■□□□□ 0.46
EXOSC3-201ENST00000327304 FAM174BQ3ZCQ3 159 aa17.9■□□□□ 0.46
EXOSC3-201ENST00000327304 VN1R5Q7Z5H4 357 aa17.9■□□□□ 0.46
EXOSC3-201ENST00000327304 ANKRD53Q8N9V6 530 aa17.9■□□□□ 0.46
EXOSC3-201ENST00000327304 NRG4Q8WWG1 115 aa17.9■□□□□ 0.46
EXOSC3-201ENST00000327304 ZDHHC12Q96GR4 267 aa17.9■□□□□ 0.46
EXOSC3-201ENST00000327304 NUDT22Q9BRQ3 303 aa17.9■□□□□ 0.46
EXOSC3-201ENST00000327304 PCDHAC1Q9H158 963 aa17.9■□□□□ 0.46
EXOSC3-201ENST00000327304 MUC13Q9H3R2 512 aa17.9■□□□□ 0.46
EXOSC3-201ENST00000327304 KLHL3Q9UH77 587 aa17.9■□□□□ 0.46
EXOSC3-201ENST00000327304 HCN4Q9Y3Q4 1203 aa17.9■□□□□ 0.46
EXOSC3-201ENST00000327304 UNC13CQ8NB66 2214 aa17.9■□□□□ 0.46
EXOSC3-201ENST00000327304 ZNF292O60281 2723 aa17.89■□□□□ 0.46
EXOSC3-201ENST00000327304 A0A1W2PQM1 296 aa17.89■□□□□ 0.45
EXOSC3-201ENST00000327304 TRBC2A0A5B9 178 aa17.89■□□□□ 0.45
EXOSC3-201ENST00000327304 SLC9B1P1A6NJY1 282 aa17.89■□□□□ 0.45
EXOSC3-201ENST00000327304 OR1F1O43749 312 aa17.89■□□□□ 0.45
EXOSC3-201ENST00000327304 MYO1DO94832 1006 aa17.89■□□□□ 0.45
EXOSC3-201ENST00000327304 KCNH1O95259 989 aa17.89■□□□□ 0.45
EXOSC3-201ENST00000327304 RPLP0P05388 317 aaKnown RBP17.89■□□□□ 0.45
EXOSC3-201ENST00000327304 C8BP07358 591 aa17.89■□□□□ 0.45
EXOSC3-201ENST00000327304 PRPS1L1P21108 318 aa17.89■□□□□ 0.45
EXOSC3-201ENST00000327304 ACSM2AQ08AH3 577 aa17.89■□□□□ 0.45
EXOSC3-201ENST00000327304 MAPKAPK3Q16644 382 aa17.89■□□□□ 0.45
EXOSC3-201ENST00000327304 SPIN4Q56A73 249 aa17.89■□□□□ 0.45
EXOSC3-201ENST00000327304 SPANXN4Q5MJ08 99 aa17.89■□□□□ 0.45
EXOSC3-201ENST00000327304 C6orf10Q5SRN2 563 aa17.89■□□□□ 0.45
EXOSC3-201ENST00000327304 ACSM2BQ68CK6 577 aa17.89■□□□□ 0.45
EXOSC3-201ENST00000327304 NANOGP8Q6NSW7 305 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms