RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 YES1P07947 543 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 CD1EP15812 388 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 HTR1BP28222 390 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 SUOXP51687 545 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 TMEM44Q2T9K0 475 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 TBC1D25Q3MII6 688 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 DENND6BQ8NEG7 585 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 C14orf119Q9NWQ9 140 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 URADA6NGE7 173 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 BTN3A3O00478 584 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 TSPAN6O43657 245 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 SLC2A2P11168 524 aaPredicted RBP14.2□□□□□ -0.14
TCOF1-201ENST00000323668 ITGAMP11215 1152 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 ETFAP13804 333 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 GSTM3P21266 225 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 FUT4P22083 530 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 KHKP50053 298 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 SMSP52788 366 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 TMEM115Q12893 351 aaPredicted RBP14.2□□□□□ -0.14
TCOF1-201ENST00000323668 SUSD1Q6UWL2 747 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 LINC00471Q8N535 108 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 EGLN2Q96KS0 407 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 FBXW2Q9UKT8 454 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 ERVW-1Q9UQF0 538 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 SEC14L2O76054 403 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 E2F2Q14209 437 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 TCEA2Q15560 299 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 TBPL2Q6SJ96 375 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 CBARPQ8N350 705 aaPredicted RBP14.2□□□□□ -0.14
TCOF1-201ENST00000323668 CD99L2Q8TCZ2 262 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 RAB8BQ92930 207 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 MUL1Q969V5 352 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 MED28Q9H204 178 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 ELAC1Q9H777 363 aaKnown RBP14.2□□□□□ -0.14
TCOF1-201ENST00000323668 PHPT1Q9NRX4 125 aaPredicted RBP14.2□□□□□ -0.14
TCOF1-201ENST00000323668 ADAMTSL1Q8N6G6 1762 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 IGLV3-25P01717 112 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 SAGP10523 405 aaPredicted RBP14.2□□□□□ -0.14
TCOF1-201ENST00000323668 NDUFA9Q16795 377 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 CPZQ66K79 652 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 NADSYN1Q6IA69 706 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 KLHDC9Q8NEP7 349 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 NEK6Q9HC98 313 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 DKK3Q9UBP4 350 aa14.2□□□□□ -0.14
TCOF1-201ENST00000323668 IGLV3-10A0A075B6K4 115 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 SCAMP2O15127 329 aaKnown RBP14.19□□□□□ -0.14
TCOF1-201ENST00000323668 CKMT1AP12532 417 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 JUNBP17275 347 aaPredicted RBP14.19□□□□□ -0.14
TCOF1-201ENST00000323668 CRISP1P54107 249 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 ZNF311Q5JNZ3 666 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 IZUMO1Q8IYV9 350 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 OR9A1PQ8NGU1 263 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 CYB5D2Q8WUJ1 264 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 TP53INP1Q96A56 240 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 IGSF21Q96ID5 467 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 LATS1O95835 1130 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 RPL4P36578 427 aaKnown RBP14.19□□□□□ -0.14
TCOF1-201ENST00000323668 CCR8P51685 355 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 FCHO2Q0JRZ9 810 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 SPHARQ15513 63 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 NDUFAF6Q330K2 333 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 XKR7Q5GH72 579 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 PLPP4Q5VZY2 271 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 CRTC1Q6UUV9 634 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 GALNT12Q8IXK2 581 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 ZNF366Q8N895 744 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 HUS1BQ8NHY5 278 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 KAT2AQ92830 837 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 PCDHGA10Q9Y5H3 936 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 OR7A17O14581 309 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 MMP2P08253 660 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 PFKLP17858 780 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 NCBP2P52298 156 aaKnown RBP eCLIP14.19□□□□□ -0.141e-8■■□□□ 13.6
TCOF1-201ENST00000323668 ACVR1Q04771 509 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 CLEC12AQ5QGZ9 265 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 CHPFQ8IZ52 775 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 RGMAQ96B86 450 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 CXorf40BQ96DE9 158 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 BARD1Q99728 777 aaKnown RBP14.19□□□□□ -0.14
TCOF1-201ENST00000323668 IL36AQ9UHA7 158 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 CLEC4AQ9UMR7 237 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 SLC27A6Q9Y2P4 619 aa14.19□□□□□ -0.14
TCOF1-201ENST00000323668 DYRK3O43781 588 aa14.18□□□□□ -0.14
TCOF1-201ENST00000323668 PTTG1O95997 202 aa14.18□□□□□ -0.14
TCOF1-201ENST00000323668 SOD2P04179 222 aa14.18□□□□□ -0.14
TCOF1-201ENST00000323668 INHAP05111 366 aa14.18□□□□□ -0.14
TCOF1-201ENST00000323668 C1GALT1C1LP0DN25 315 aa14.18□□□□□ -0.14
TCOF1-201ENST00000323668 PTPN2P17706 415 aa14.18□□□□□ -0.14
TCOF1-201ENST00000323668 CTNNB1P35222 781 aa14.18□□□□□ -0.14
TCOF1-201ENST00000323668 MEF2AQ02078 507 aaPredicted RBP14.18□□□□□ -0.14
TCOF1-201ENST00000323668 SLC9A5Q14940 896 aa14.18□□□□□ -0.14
TCOF1-201ENST00000323668 NAGSQ8N159 534 aa14.18□□□□□ -0.14
TCOF1-201ENST00000323668 OR6Q1Q8NGQ2 317 aa14.18□□□□□ -0.14
TCOF1-201ENST00000323668 YIPF4Q9BSR8 244 aa14.18□□□□□ -0.14
TCOF1-201ENST00000323668 NKIRAS2Q9NYR9 191 aa14.18□□□□□ -0.14
TCOF1-201ENST00000323668 SLCO3A1Q9UIG8 710 aa14.18□□□□□ -0.14
TCOF1-201ENST00000323668 OR6C70A6NIJ9 312 aa14.18□□□□□ -0.14
TCOF1-201ENST00000323668 ARHGEF33A8MVX0 844 aa14.18□□□□□ -0.14
TCOF1-201ENST00000323668 DLGAP1O14490 977 aa14.18□□□□□ -0.14
TCOF1-201ENST00000323668 IFNGP01579 166 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms