RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 PIP5K1AQ99755 562 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 FDXACB1Q9BRP7 624 aaPredicted RBP6.83□□□□□ -1.32
SMC1A-201ENST00000322213 BHLHE41Q9C0J9 482 aaPredicted RBP6.83□□□□□ -1.32
SMC1A-201ENST00000322213 GPR83Q9NYM4 423 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 SHANK3Q9BYB0 1731 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 SNED1Q8TER0 1413 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 LCHNA4D1U4 455 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 PRAMEF12O95522 483 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 CYB5AP00167 134 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 S100A8P05109 93 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 HOXC6P09630 235 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 TAL1P17542 331 aaPredicted RBP6.83□□□□□ -1.32
SMC1A-201ENST00000322213 GADD45AP24522 165 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 RPS14P62263 151 aaKnown RBP6.83□□□□□ -1.32
SMC1A-201ENST00000322213 ZNF33AQ06730 810 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 TUBB3Q13509 450 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 IRAK1BP1Q5VVH5 260 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 TRMT11Q7Z4G4 463 aaKnown RBP6.83□□□□□ -1.32
SMC1A-201ENST00000322213 RETREG3Q86VR2 466 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 CHFRQ96EP1 664 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 SGTBQ96EQ0 304 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 ABCG8Q9H221 673 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 PRKAB1Q9Y478 270 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 A0A1B0GVM2 712 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 IVDP26440 423 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 ACVR2AP27037 513 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 ERVFC1P60507 584 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 ERVK-25P63136 954 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 ZNHIT3Q15649 155 aaPredicted RBP6.83□□□□□ -1.32
SMC1A-201ENST00000322213 PXDC1Q5TGL8 231 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 ALG1LQ6GMV1 187 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 CYS1Q717R9 158 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 ATP6V1C2Q8NEY4 427 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 OR4K2Q8NGD2 314 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 SLC29A3Q9BZD2 475 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 EMC7Q9NPA0 242 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 PCDHB7Q9Y5E2 793 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 HRH3Q9Y5N1 445 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 A0A0G2JMP0 313 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 SOBPA7XYQ1 873 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 F8W036 122 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 TLL1O43897 1013 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 RRAS2P62070 204 aaPredicted RBP6.83□□□□□ -1.32
SMC1A-201ENST00000322213 BLOC1S1P78537 153 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 SREBF2Q12772 1141 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 DALRD3Q5D0E6 543 aaKnown RBP6.83□□□□□ -1.32
SMC1A-201ENST00000322213 ZFAND4Q86XD8 727 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 CEP97Q8IW35 865 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 OR4M2Q8NGB6 313 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 ACER1Q8TDN7 264 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 NR4A3Q92570 626 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 ATG4CQ96DT6 458 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 CCDC3Q9BQI4 270 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 DUSP26Q9BV47 211 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 ABCG4Q9H172 646 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 TANC2Q9HCD6 1990 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 A0A1B0GVC2 190 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 PRAF2O60831 178 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 MT-CYBP00156 380 aaPredicted RBP6.83□□□□□ -1.32
SMC1A-201ENST00000322213 MT-ND2P03891 347 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 ATXN8OSP0DMR3 200 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 SOX3P41225 446 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 FLI1Q01543 452 aaPredicted RBP6.83□□□□□ -1.32
SMC1A-201ENST00000322213 GRK1Q15835 563 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 RTL4Q6ZR62 310 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 MARCH9Q86YJ5 346 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 SNX29P2Q8IUI4 249 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 CRYBG2Q8N1P7 616 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 KDM1BQ8NB78 822 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 DOHHQ9BU89 302 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 FAM120CQ9NX05 1096 aaKnown RBP6.83□□□□□ -1.32
SMC1A-201ENST00000322213 BUD23O43709 281 aaKnown RBP6.83□□□□□ -1.32
SMC1A-201ENST00000322213 PPP1R11O60927 126 aaPredicted RBP6.83□□□□□ -1.32
SMC1A-201ENST00000322213 OR4F21O95013 312 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 MATN4O95460 622 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 UBBP0CG47 229 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 UBCP0CG48 685 aaKnown RBP6.83□□□□□ -1.32
SMC1A-201ENST00000322213 RHCEP18577 417 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 TLX1P31314 330 aaPredicted RBP6.83□□□□□ -1.32
SMC1A-201ENST00000322213 RPS27AP62979 156 aaKnown RBP6.83□□□□□ -1.32
SMC1A-201ENST00000322213 UBA52P62987 128 aaKnown RBP6.83□□□□□ -1.32
SMC1A-201ENST00000322213 GRIK4Q16099 956 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 ZNF678Q5SXM1 525 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 HACD4Q5VWC8 232 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 FAM117BQ6P1L5 589 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 PAQR7Q86WK9 346 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 THRSPQ92748 146 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 MAP6Q96JE9 813 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 HBEGFQ99075 208 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 B3GNT2Q9NY97 397 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 POLLQ9UGP5 575 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 RUVBL1Q9Y265 456 aaKnown RBP6.83□□□□□ -1.32
SMC1A-201ENST00000322213 TPST2O60704 377 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 IFNA10P01566 189 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 IFNA4P05014 189 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 ANXA4P09525 319 aaPredicted RBP6.83□□□□□ -1.32
SMC1A-201ENST00000322213 ADH6P28332 368 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 TMEM69Q5SWH9 247 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 TSTD2Q5T7W7 516 aa6.83□□□□□ -1.32
SMC1A-201ENST00000322213 ZNF467Q7Z7K2 595 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms