RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 RGS6P49758 472 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 CRISP1P54107 249 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 KCNC4Q03721 635 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 ZNF763Q0D2J5 394 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 INAVAQ3KP66 663 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 CRB2Q5IJ48 1285 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 CEACAM20Q6UY09 585 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 ZNF783Q6ZMS7 281 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 LYSMD2Q8IV50 215 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 UBE2FQ969M7 185 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 FAIM2Q9BWQ8 316 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 OR51B5Q9H339 312 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 REEP4Q9H6H4 257 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 AKIP1Q9NQ31 210 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 ABCB8Q9NUT2 735 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 ZNF840PA6NDX5 716 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 FAM47E-STBD1D6RA91 191 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 FGBP02675 491 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 CLTBP09497 229 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 CDKN2CP42773 168 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 TAS2R50P59544 299 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 HNRNPA0Q13151 305 aaKnown RBP12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 WSCD2Q2TBF2 565 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 MACC1Q6ZN28 852 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 NPAS4Q8IUM7 802 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 CDK20Q8IZL9 346 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 DNASE1L2Q92874 299 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 FER1L6Q2WGJ9 1857 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 M0R129 80 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 PQBP1O60828 265 aaKnown RBP12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 NOS1APO75052 506 aaPredicted RBP12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 PEX11BO96011 259 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 KLK1P06870 262 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 ELNP15502 786 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 EIF2DP41214 584 aaKnown RBP12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 PIK3CBP42338 1070 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 BDKRB1P46663 353 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 NRIP1P48552 1158 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 EIF4HQ15056 248 aaKnown RBP12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 CTF1Q16619 201 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 PLEKHS1Q5SXH7 462 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 LIPKQ5VXJ0 399 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 TRIM46Q7Z4K8 759 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 NAGSQ8N159 534 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 RDH14Q9HBH5 336 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 SLC25A37Q9NYZ2 338 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 ZNF639Q9UID6 485 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 YIPF1Q9Y548 306 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 PRSS21Q9Y6M0 314 aa12.28□□□□□ -0.44
DNMT3A-202ENST00000321117 AP3D1O14617 1153 aa12.27□□□□□ -0.44
DNMT3A-202ENST00000321117 CHST10O43529 356 aa12.27□□□□□ -0.44
DNMT3A-202ENST00000321117 KLK8O60259 260 aa12.27□□□□□ -0.44
DNMT3A-202ENST00000321117 CCNYL3P0C7X3 344 aa12.27□□□□□ -0.44
DNMT3A-202ENST00000321117 RFX3P48380 749 aa12.27□□□□□ -0.44
DNMT3A-202ENST00000321117 GNG2P59768 71 aa12.27□□□□□ -0.44
DNMT3A-202ENST00000321117 ATP13A5Q4VNC0 1218 aa12.27□□□□□ -0.44
DNMT3A-202ENST00000321117 ZNF648Q5T619 568 aaPredicted RBP12.27□□□□□ -0.44
DNMT3A-202ENST00000321117 TXNDC8Q6A555 127 aa12.27□□□□□ -0.44
DNMT3A-202ENST00000321117 ZNF730Q6ZMV8 503 aa12.27□□□□□ -0.44
DNMT3A-202ENST00000321117 CCDC149Q6ZUS6 474 aa12.27□□□□□ -0.44
DNMT3A-202ENST00000321117 DNAJB7Q7Z6W7 309 aaPredicted RBP12.27□□□□□ -0.44
DNMT3A-202ENST00000321117 ZNF614Q8N883 585 aa12.27□□□□□ -0.44
DNMT3A-202ENST00000321117 ZNF557Q8N988 423 aaPredicted RBP12.27□□□□□ -0.44
DNMT3A-202ENST00000321117 OR9Q2Q8NGE9 314 aa12.27□□□□□ -0.44
DNMT3A-202ENST00000321117 DYNC2LI1Q8TCX1 351 aa12.27□□□□□ -0.44
DNMT3A-202ENST00000321117 ZNF558Q96NG5 402 aa12.27□□□□□ -0.44
DNMT3A-202ENST00000321117 CARD8Q9Y2G2 431 aa12.27□□□□□ -0.44
DNMT3A-202ENST00000321117 A0A1W2PQ72 361 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 NEDD8-MDP1E9PL57 170 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 PITPNM1O00562 1244 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 SCAMP2O15127 329 aaKnown RBP12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 AMD1P17707 334 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 NOS3P29474 1203 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 TIA1P31483 386 aaKnown RBP eCLIP12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 CNR2P34972 360 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 CASP3P42574 277 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 CTBSQ01459 385 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 RGNQ15493 299 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 GTF2IRD2BQ6EKJ0 949 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 TMEM179BQ7Z7N9 219 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 TSPAN33Q86UF1 283 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 GTF2IRD2Q86UP8 949 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 LACC1Q8IV20 430 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 FAM83FQ8NEG4 500 aaPredicted RBP12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 GGHQ92820 318 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 ART5Q96L15 291 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 CSF3RQ99062 836 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 SLC12A9Q9BXP2 914 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 MED28Q9H204 178 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 B4GALT6Q9UBX8 382 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 ZFC3H1O60293 1989 aaKnown RBP12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 CTDSP2O14595 271 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 SELPP16109 830 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 LIPAP38571 399 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 SSR2P43308 183 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 SELENOWP63302 87 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 FADDQ13158 208 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 IRF5Q13568 498 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 ANGPT1Q15389 498 aa12.27□□□□□ -0.45
DNMT3A-202ENST00000321117 ZNF697Q5TEC3 545 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms