RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 TNFRSF21O75509 655 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 TRAPPC2P0DI81 140 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 TRAPPC2BP0DI82 140 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 GKP32189 559 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 ZNF157P51786 506 aaPredicted RBP13.3□□□□□ -0.28
MKS1-201ENST00000313863 ACLYP53396 1101 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 RHAGQ02094 409 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 GAB1Q13480 694 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 MEDAGQ5VYS4 303 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 TPGS2Q68CL5 300 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 PTCHD4Q6ZW05 846 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 TSEN54Q7Z6J9 526 aaKnown RBP13.3□□□□□ -0.28
MKS1-201ENST00000313863 RASGRP3Q8IV61 690 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 UBQLNLQ8IYU4 475 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 OR8H2Q8N162 312 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 WFDC5Q8TCV5 224 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 ELMO1Q92556 727 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 NIPSNAP1Q9BPW8 284 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 TCF25Q9BQ70 676 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 CLSTN3Q9BQT9 956 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 TSEN34Q9BSV6 310 aaKnown RBP13.3□□□□□ -0.28
MKS1-201ENST00000313863 SYT17Q9BSW7 474 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 BBS2Q9BXC9 721 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 SUV39H2Q9H5I1 410 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 FBXL12Q9NXK8 326 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 ANGPT4Q9Y264 503 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 CASP8AP2Q9UKL3 1982 aa13.3□□□□□ -0.28
MKS1-201ENST00000313863 FADS2P1A8MWK0 482 aa13.29□□□□□ -0.28
MKS1-201ENST00000313863 ZNF197O14709 1029 aa13.29□□□□□ -0.28
MKS1-201ENST00000313863 CAPN5O15484 640 aaPredicted RBP13.29□□□□□ -0.28
MKS1-201ENST00000313863 PCDH7O60245 1069 aa13.29□□□□□ -0.28
MKS1-201ENST00000313863 GCM2O75603 506 aaPredicted RBP13.29□□□□□ -0.28
MKS1-201ENST00000313863 GADD45GO95257 159 aa13.29□□□□□ -0.28
MKS1-201ENST00000313863 CD22P20273 847 aa13.29□□□□□ -0.28
MKS1-201ENST00000313863 TCEA1P23193 301 aaKnown RBP13.29□□□□□ -0.28
MKS1-201ENST00000313863 BMPR1AP36894 532 aa13.29□□□□□ -0.28
MKS1-201ENST00000313863 XCR1P46094 333 aa13.29□□□□□ -0.28
MKS1-201ENST00000313863 CYP4F2P78329 520 aa13.29□□□□□ -0.28
MKS1-201ENST00000313863 RAE1P78406 368 aaKnown RBP13.29□□□□□ -0.28
MKS1-201ENST00000313863 RUNX1T1Q06455 604 aa13.29□□□□□ -0.28
MKS1-201ENST00000313863 CRB2Q5IJ48 1285 aa13.29□□□□□ -0.28
MKS1-201ENST00000313863 MPP7Q5T2T1 576 aa13.29□□□□□ -0.28
MKS1-201ENST00000313863 Q6ZNB5 142 aa13.29□□□□□ -0.28
MKS1-201ENST00000313863 RAB43Q86YS6 212 aa13.29□□□□□ -0.28
MKS1-201ENST00000313863 VRK3Q8IV63 474 aa13.29□□□□□ -0.28
MKS1-201ENST00000313863 CLIP4Q8N3C7 705 aa13.29□□□□□ -0.28
MKS1-201ENST00000313863 RNF175Q8N4F7 328 aa13.29□□□□□ -0.28
MKS1-201ENST00000313863 FAM46DQ8NEK8 389 aa13.29□□□□□ -0.28
MKS1-201ENST00000313863 OR52J3Q8NH60 311 aa13.29□□□□□ -0.28
MKS1-201ENST00000313863 WDR36Q8NI36 951 aaKnown RBP13.29□□□□□ -0.28
MKS1-201ENST00000313863 TIFAQ96CG3 184 aa13.29□□□□□ -0.28
MKS1-201ENST00000313863 ECHDC3Q96DC8 303 aa13.29□□□□□ -0.28
MKS1-201ENST00000313863 FAM129BQ96TA1 746 aa13.29□□□□□ -0.28
MKS1-201ENST00000313863 SLC35A5Q9BS91 424 aa13.29□□□□□ -0.28
MKS1-201ENST00000313863 REEP4Q9H6H4 257 aa13.29□□□□□ -0.28
MKS1-201ENST00000313863 RLIMQ9NVW2 624 aa13.29□□□□□ -0.28
MKS1-201ENST00000313863 QPCTLQ9NXS2 382 aa13.29□□□□□ -0.28
MKS1-201ENST00000313863 SEC14L4Q9UDX3 406 aa13.29□□□□□ -0.28
MKS1-201ENST00000313863 ZAR1LA6NP61 321 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 E7EQ34 232 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 CATP04040 527 aaKnown RBP13.28□□□□□ -0.28
MKS1-201ENST00000313863 RHCEP18577 417 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 MAGP20916 626 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 CBLP22681 906 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 RCVRNP35243 200 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 HTR3AP46098 478 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 LIMS1P48059 325 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 SPINT3P49223 89 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 PTSQ03393 145 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 PTGES3Q15185 160 aaKnown RBP13.28□□□□□ -0.28
MKS1-201ENST00000313863 ARMC4Q5T2S8 1044 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 KIAA1841Q6NSI8 718 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 ATCAYQ86WG3 371 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 BBS7Q8IWZ6 715 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 OR9Q1Q8NGQ5 310 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 OR6F1Q8NGZ6 308 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 ZNF461Q8TAF7 563 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 TAPBPLQ9BX59 468 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 RNF167Q9H6Y7 350 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 TMEM184CQ9NVA4 438 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 YIPF1Q9Y548 306 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 CFAP20Q9Y6A4 193 aaKnown RBP13.28□□□□□ -0.28
MKS1-201ENST00000313863 ENPP4Q9Y6X5 453 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 A8MU76 341 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 ARHGAP33O14559 1287 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 PSIP1O75475 530 aaKnown RBP13.28□□□□□ -0.28
MKS1-201ENST00000313863 SLCO2B1O94956 709 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 SCG5P05408 212 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 ETFAP13804 333 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 RPL17P18621 184 aaKnown RBP13.28□□□□□ -0.28
MKS1-201ENST00000313863 ENDOUP21128 410 aaKnown RBP13.28□□□□□ -0.28
MKS1-201ENST00000313863 CHMP24386 653 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 TNFSF8P32971 234 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 CSTF2P33240 577 aaKnown RBP eCLIP13.28□□□□□ -0.28
MKS1-201ENST00000313863 FLT3LGP49771 235 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 GATMP50440 423 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 RORCP51449 518 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 NKX2-5P52952 324 aaPredicted RBP13.28□□□□□ -0.28
MKS1-201ENST00000313863 CRISP1P54107 249 aa13.28□□□□□ -0.28
MKS1-201ENST00000313863 POLR2LP62875 67 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms