RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 MAPK15Q8TD08 544 aa8.52□□□□□ -1.04
COL6A5-202ENST00000312481 FAM129BQ96TA1 746 aa8.52□□□□□ -1.04
COL6A5-202ENST00000312481 NUBP2Q9Y5Y2 271 aa8.52□□□□□ -1.04
COL6A5-202ENST00000312481 B8ZZF3 427 aa8.52□□□□□ -1.04
COL6A5-202ENST00000312481 SLC1A7O00341 560 aa8.52□□□□□ -1.04
COL6A5-202ENST00000312481 UBL4AP11441 157 aa8.52□□□□□ -1.04
COL6A5-202ENST00000312481 TSFMP43897 325 aaKnown RBP8.52□□□□□ -1.04
COL6A5-202ENST00000312481 DUSP6Q16828 381 aa8.52□□□□□ -1.04
COL6A5-202ENST00000312481 RAP1GAP2Q684P5 730 aa8.52□□□□□ -1.04
COL6A5-202ENST00000312481 MAMDC4Q6UXC1 1216 aa8.52□□□□□ -1.04
COL6A5-202ENST00000312481 TRAM1L1Q8N609 369 aa8.52□□□□□ -1.04
COL6A5-202ENST00000312481 PKP2Q99959 881 aa8.52□□□□□ -1.04
COL6A5-202ENST00000312481 C11orf49Q9H6J7 331 aa8.52□□□□□ -1.04
COL6A5-202ENST00000312481 FAM118AQ9NWS6 357 aa8.52□□□□□ -1.04
COL6A5-202ENST00000312481 PCDHGA4Q9Y5G9 962 aa8.52□□□□□ -1.04
COL6A5-202ENST00000312481 E2F8A0AVK6 867 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 CLCA1A8K7I4 914 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 F2P00734 622 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 GNALP38405 381 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 TNFSF9P41273 254 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 TAF10Q12962 218 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 SF3A2Q15428 464 aaKnown RBP8.52□□□□□ -1.05
COL6A5-202ENST00000312481 SOWAHAQ2M3V2 549 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 COL28A1Q2UY09 1125 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 RFWD3Q6PCD5 774 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 DNAJC22Q8N4W6 341 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 ADAMTS19Q8TE59 1207 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 SNAPC3Q92966 411 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 TBATAQ96M53 351 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 PBDC1Q9BVG4 233 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 RLN1P04808 185 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 LINGO3P0C6S8 592 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 TARDBPQ13148 414 aaKnown RBP eCLIP8.52□□□□□ -1.05
COL6A5-202ENST00000312481 ACTBL2Q562R1 376 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 CREB3L2Q70SY1 520 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 C16orf59Q7L2K0 433 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 TXNDC5Q8NBS9 432 aaKnown RBP8.52□□□□□ -1.05
COL6A5-202ENST00000312481 OIT3Q8WWZ8 545 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 ARNTL2Q8WYA1 636 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 NACC2Q96BF6 587 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 NELFAQ9H3P2 528 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 GLTPQ9NZD2 209 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 EIF4E1BA6NMX2 242 aaKnown RBP8.52□□□□□ -1.05
COL6A5-202ENST00000312481 RAB40ALP0C0E4 278 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 E2F1Q01094 437 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 PRPF38BQ5VTL8 546 aaKnown RBP8.52□□□□□ -1.05
COL6A5-202ENST00000312481 RNF165Q6ZSG1 346 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 SLC2A12Q8TD20 617 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 RAB40AQ8WXH6 277 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 KATNBL1Q9H079 304 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 ATXN3LQ9H3M9 355 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 ABCD2Q9UBJ2 740 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 NAALAD2Q9Y3Q0 740 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 BORCS7-ASMTA0A0B4J1R7 106 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 A0A1W2PQ45 241 aaPredicted RBP8.52□□□□□ -1.05
COL6A5-202ENST00000312481 A0A1W2PQY0 241 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 TNFRSF10BO14763 440 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 DNTTP04053 509 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 HLA-DQB2P05538 268 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 PRPS1P60891 318 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 ZNF234Q14588 700 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 TRMT10BQ6PF06 316 aaKnown RBP8.52□□□□□ -1.05
COL6A5-202ENST00000312481 FAM98AQ8NCA5 519 aaKnown RBP8.52□□□□□ -1.05
COL6A5-202ENST00000312481 ISYNA1Q9NPH2 558 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 PIGVQ9NUD9 493 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 FZD4Q9ULV1 537 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 WRBO00258 174 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 RGS9O75916 674 aaPredicted RBP8.52□□□□□ -1.05
COL6A5-202ENST00000312481 MAP3K6O95382 1288 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 FUT10Q6P4F1 479 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 LRRTM4Q86VH4 590 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 OR2AP1Q8NGE2 309 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 ZC3H10Q96K80 434 aaKnown RBP8.52□□□□□ -1.05
COL6A5-202ENST00000312481 OR2M2Q96R28 347 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 DEC1Q9P2X7 70 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 PTPRDP23468 1912 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 FFAR3O14843 346 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 GPR42O15529 346 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 GPRIN2O60269 458 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 ATP1B2P14415 290 aaPredicted RBP8.52□□□□□ -1.05
COL6A5-202ENST00000312481 CDH12P55289 794 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 NRG3P56975 720 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 CRADDP78560 199 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 MTM1Q13496 603 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 SIRPB2Q5JXA9 342 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 B3GNT9Q6UX72 402 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 ZNF675Q8TD23 568 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 XKR8Q9H6D3 395 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 CRTAC1Q9NQ79 661 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 DCAF13Q9NV06 445 aaKnown RBP8.52□□□□□ -1.05
COL6A5-202ENST00000312481 NUDT15Q9NV35 164 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 FAM86C1Q9NVL1 165 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 ABI3Q9P2A4 366 aa8.52□□□□□ -1.05
COL6A5-202ENST00000312481 DNAJC13O75165 2243 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 MANBAO00462 879 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 PGLSO95336 258 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 APODP05090 189 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 MAP2K3P46734 347 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 CDH11P55287 796 aa8.51□□□□□ -1.05
COL6A5-202ENST00000312481 PDGFRLQ15198 375 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms