RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 MAOAP21397 527 aa11.37□□□□□ -0.59
SCFD1-201ENST00000311943 AHRP35869 848 aa11.37□□□□□ -0.59
SCFD1-201ENST00000311943 RPS13P62277 151 aaKnown RBP11.37□□□□□ -0.59
SCFD1-201ENST00000311943 OCA2Q04671 838 aa11.37□□□□□ -0.59
SCFD1-201ENST00000311943 KCNAB2Q13303 367 aa11.37□□□□□ -0.59
SCFD1-201ENST00000311943 PWP1Q13610 501 aa11.37□□□□□ -0.59
SCFD1-201ENST00000311943 NAA25Q14CX7 972 aa11.37□□□□□ -0.59
SCFD1-201ENST00000311943 CDKL4Q5MAI5 379 aa11.37□□□□□ -0.59
SCFD1-201ENST00000311943 GARNL3Q5VVW2 1013 aa11.37□□□□□ -0.59
SCFD1-201ENST00000311943 SRRM1Q8IYB3 904 aaKnown RBP11.37□□□□□ -0.59
SCFD1-201ENST00000311943 OR4F6Q8NGB9 312 aa11.37□□□□□ -0.59
SCFD1-201ENST00000311943 MECRQ9BV79 373 aa11.37□□□□□ -0.59
SCFD1-201ENST00000311943 ACTR8Q9H981 624 aa11.37□□□□□ -0.59
SCFD1-201ENST00000311943 ZNF160Q9HCG1 818 aa11.37□□□□□ -0.59
SCFD1-201ENST00000311943 LANCL2Q9NS86 450 aa11.37□□□□□ -0.59
SCFD1-201ENST00000311943 GPRC5BQ9NZH0 403 aa11.37□□□□□ -0.59
SCFD1-201ENST00000311943 ANKDD1BA6NHY2 528 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 IPO13O94829 963 aaKnown RBP11.36□□□□□ -0.59
SCFD1-201ENST00000311943 OR4F21O95013 312 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 F10P00742 488 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 ALBP02768 609 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 PROCP04070 461 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 RPS17P08708 135 aaKnown RBP11.36□□□□□ -0.59
SCFD1-201ENST00000311943 NUDT17P0C025 328 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 COL6A2P12110 1019 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 CHN1P15882 459 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 MMP11P24347 488 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 AVPR1BP47901 424 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 EMP2P54851 167 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 FOXA1P55317 472 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 ZNF844Q08AG5 666 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 E2F2Q14209 437 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 ZRSR2Q15696 482 aaKnown RBP11.36□□□□□ -0.59
SCFD1-201ENST00000311943 DCAF10Q5QP82 559 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 LGSNQ5TDP6 509 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 YOD1Q5VVQ6 348 aaPredicted RBP11.36□□□□□ -0.59
SCFD1-201ENST00000311943 SCIMPQ6UWF3 145 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 FAM47BQ8NA70 645 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 FKBP10Q96AY3 582 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 MTBPQ96DY7 904 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 REXO4Q9GZR2 422 aaKnown RBP11.36□□□□□ -0.59
SCFD1-201ENST00000311943 PRM3Q9NNZ6 103 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 PRDM7Q9NQW5 492 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 COPG2Q9UBF2 871 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 FETUBQ9UGM5 382 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 SLC22A7Q9Y694 548 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 DOCK10Q96BY6 2186 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 COL6A6A6NMZ7 2263 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 A0A1W2PS29 197 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 H2AFYO75367 372 aaKnown RBP11.36□□□□□ -0.59
SCFD1-201ENST00000311943 SUPT7LO94864 414 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 SERPINA6P08185 405 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 HTR6P50406 440 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 NDUFA9Q16795 377 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 TSNAXIP1Q2TAA8 658 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 ZNF678Q5SXM1 525 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 EMBQ6PCB8 327 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 TDRPQ86YL5 185 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 CA13Q8N1Q1 262 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 THAP11Q96EK4 314 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 QRFPRQ96P65 431 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 ZIM3Q96PE6 472 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 CCDC77Q9BR77 488 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 MS4A8Q9BY19 250 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 MFRPQ9BY79 579 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 TRIM4Q9C037 500 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 WDR54Q9H977 334 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 NECTIN3Q9NQS3 549 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 PADI2Q9Y2J8 665 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 TIMM22Q9Y584 194 aa11.36□□□□□ -0.59
SCFD1-201ENST00000311943 A8MUA0 341 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 H0YIG0 161 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 AGPSO00116 658 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 PLIN3O60664 434 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 SEC24DO94855 1032 aaPredicted RBP11.35□□□□□ -0.59
SCFD1-201ENST00000311943 HEXBP07686 556 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 COX6A1P12074 109 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 EMP3P54852 163 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 MC1RQ01726 317 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 ID2Q02363 134 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 RGS1Q08116 209 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 IFFO1Q0D2I5 559 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 ILF2Q12905 390 aaKnown RBP11.35□□□□□ -0.59
SCFD1-201ENST00000311943 RBBP7Q16576 425 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 CRTC2Q53ET0 693 aaPredicted RBP11.35□□□□□ -0.59
SCFD1-201ENST00000311943 CES4AQ5XG92 561 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 B3GNTL1Q67FW5 361 aaPredicted RBP11.35□□□□□ -0.59
SCFD1-201ENST00000311943 GRHL2Q6ISB3 625 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 MED27Q6P2C8 311 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 ABHD17CQ6PCB6 329 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 CLNKQ7Z7G1 428 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 TRABD2AQ86V40 505 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 LAS2Q8IYD9 372 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 KRT78Q8N1N4 520 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 TRPV3Q8NET8 790 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 WDR20Q8TBZ3 569 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 ZNF483Q8TF39 744 aaPredicted RBP11.35□□□□□ -0.59
SCFD1-201ENST00000311943 THAP4Q8WY91 577 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 ATP6V1E2Q96A05 226 aa11.35□□□□□ -0.59
SCFD1-201ENST00000311943 EHD1Q9H4M9 534 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms