RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 NDRG1Q92597 394 aaKnown RBP7.92□□□□□ -1.14
VPS41-202ENST00000310301 BIRC7Q96CA5 298 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 TTYH3Q9C0H2 523 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 SPHK2Q9NRA0 654 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 ACTR3BQ9P1U1 418 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 EBF1Q9UH73 591 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 FFAR2O15552 330 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 HLA-DPB1P04440 258 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 ANXA3P12429 323 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 ZNF823P16415 610 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 BMP8BP34820 402 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 SCNN1AP37088 669 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 PTPN9P43378 593 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 CD97P48960 835 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 E2F1Q01094 437 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 CCDC58Q4VC31 144 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 RTP2Q5QGT7 225 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 TSTD2Q5T7W7 516 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 TRUB1Q8WWH5 349 aaKnown RBP7.92□□□□□ -1.14
VPS41-202ENST00000310301 FAIMQ9NVQ4 179 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 GSKIPQ9P0R6 139 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 ABCD2Q9UBJ2 740 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 TOXO94900 526 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 MATN4O95460 622 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 ARL3P36405 182 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 MAP2K4P45985 399 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 GSK3BP49841 420 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 LRRC37A5PQ49AS3 106 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 XKR4Q5GH76 650 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 SLC25A25Q6KCM7 469 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 TNFAIP8L2Q6P589 184 aaPredicted RBP7.92□□□□□ -1.14
VPS41-202ENST00000310301 SCML4Q8N228 414 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 TMEM185BQ9H7F4 350 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 ZDHHC2Q9UIJ5 367 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 COL5A3P25940 1745 aaPredicted RBP7.92□□□□□ -1.14
VPS41-202ENST00000310301 TMX2-CTNND1H3BSU7 103 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 MSI1O43347 362 aaKnown RBP7.92□□□□□ -1.14
VPS41-202ENST00000310301 SLC19A2O60779 497 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 HOXD12P35452 270 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 SLC1A2P43004 574 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 AVPR1BP47901 424 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 KHKP50053 298 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 TAS2R39P59534 338 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 HERVK_113P63132 956 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 CARD16Q5EG05 197 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 SH3PXD2AQ5TCZ1 1133 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 CCBE1Q6UXH8 406 aaPredicted RBP7.92□□□□□ -1.14
VPS41-202ENST00000310301 SLC30A8Q8IWU4 369 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 CDK15Q96Q40 435 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 SLC38A3Q99624 504 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 CGREF1Q99674 301 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 ERVK-6Q9BXR3 956 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 IMP3Q9NV31 184 aaKnown RBP7.92□□□□□ -1.14
VPS41-202ENST00000310301 C14orf105Q9NVL8 296 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 PAK1IP1Q9NWT1 392 aaPredicted RBP7.92□□□□□ -1.14
VPS41-202ENST00000310301 OBP2AQ9NY56 170 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 TAS2R10Q9NYW0 307 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 RAI2Q9Y5P3 530 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 CLCA3PQ9Y6N3 262 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 COLEC10Q9Y6Z7 277 aa7.92□□□□□ -1.14
VPS41-202ENST00000310301 TVP23AA6NH52 213 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 TMEM233B4DJY2 109 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 J3QLW9 94 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 SLC31A1O15431 190 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 NUAK1O60285 661 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 CST3P01034 146 aaPredicted RBP7.91□□□□□ -1.14
VPS41-202ENST00000310301 DLDP09622 509 aaKnown RBP7.91□□□□□ -1.14
VPS41-202ENST00000310301 TACSTD2P09758 323 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 ZNF19P17023 458 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 ENGP17813 658 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 IMPDH1P20839 514 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 DNASE1P24855 282 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 GRK6P43250 576 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 MLLT6P55198 1093 aaPredicted RBP7.91□□□□□ -1.14
VPS41-202ENST00000310301 SNRPD2P62316 118 aaKnown RBP7.91□□□□□ -1.14
VPS41-202ENST00000310301 PRR5P85299 388 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 SLC10A7Q0GE19 358 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 KRBOX4Q5JUW0 171 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 DRICH1Q6PGQ1 229 aaPredicted RBP7.91□□□□□ -1.14
VPS41-202ENST00000310301 SLC2A7Q6PXP3 512 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 EPGNQ6UW88 154 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 DPY19L3Q6ZPD9 716 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 SSX6Q7RTT6 188 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 CPNE9Q8IYJ1 553 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 PYROXD2Q8N2H3 581 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 MFSD8Q8NHS3 518 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 PYURFQ96I23 114 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 TP63Q9H3D4 680 aaPredicted RBP7.91□□□□□ -1.14
VPS41-202ENST00000310301 SMURF1Q9HCE7 757 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 FZD4Q9ULV1 537 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 PCDHGB6Q9Y5F9 930 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 WDR90Q96KV7 1748 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 ZNF878C9JN71 531 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 STMND1H3BQB6 276 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 NDST3O95803 873 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 TNFP01375 233 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 OPN1SWP03999 348 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 ALPPP05187 535 aa7.91□□□□□ -1.14
VPS41-202ENST00000310301 RBMS1P29558 406 aaKnown RBP7.91□□□□□ -1.14
VPS41-202ENST00000310301 PIGFQ07326 219 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms