RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 FPR1P21462 350 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 PDHA2P29803 388 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 ST8SIA6P61647 398 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 CNTN1Q12860 1018 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 CCSAPQ6IQ19 270 aaPredicted RBP12.2□□□□□ -0.46
RETREG3-201ENST00000309428 TNFAIP8L2Q6P589 184 aaPredicted RBP12.2□□□□□ -0.46
RETREG3-201ENST00000309428 TMEM179BQ7Z7N9 219 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 C1orf52Q8N6N3 182 aaKnown RBP12.2□□□□□ -0.46
RETREG3-201ENST00000309428 MINDY2Q8NBR6 621 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 P2RY13Q9BPV8 354 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 FAM83DQ9H4H8 585 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 THG1LQ9NWX6 298 aaKnown RBP12.2□□□□□ -0.46
RETREG3-201ENST00000309428 NUDT4Q9NZJ9 180 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 FZD4Q9ULV1 537 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 CABIN1Q9Y6J0 2220 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 MYO15AQ9UKN7 3530 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 MANBAO00462 879 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 MATN4O95460 622 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 CD160O95971 181 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 ANXA4P09525 319 aaPredicted RBP12.2□□□□□ -0.46
RETREG3-201ENST00000309428 ELFN1P0C7U0 828 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 POLR2EP19388 210 aaKnown RBP12.2□□□□□ -0.46
RETREG3-201ENST00000309428 LHCGRP22888 699 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 MAT2AP31153 395 aaKnown RBP12.2□□□□□ -0.46
RETREG3-201ENST00000309428 GSTM5P46439 218 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 CLCN7P51798 805 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 COX10Q12887 443 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 BTBD16Q32M84 506 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 RHEBL1Q8TAI7 183 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 PIGKQ92643 395 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 AP2M1Q96CW1 435 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 MGLLQ99685 303 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 WACQ9BTA9 647 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 CENPOQ9BU64 300 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 CDH7Q9ULB5 785 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 IFT52Q9Y366 437 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 PCDHGA10Q9Y5H3 936 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 ZSWIM8A7E2V4 1837 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 SIP14410 1827 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 A0A1B0GVC2 190 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 A6NIN4 97 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 WASH4PA8MWX3 477 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 H3BNC9 293 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 TAPBPO15533 448 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 SPNP16150 400 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 LIPAP38571 399 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 CASP3P42574 277 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 CSNK2BP67870 215 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 GPNMBQ14956 572 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 AGAP7PQ5VUJ5 663 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 BEND5Q7L4P6 421 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 OLIG3Q7RTU3 272 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 MEX3DQ86XN8 651 aaKnown RBP12.2□□□□□ -0.46
RETREG3-201ENST00000309428 LILRB4Q8NHJ6 448 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 MUL1Q969V5 352 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 PLD4Q96BZ4 506 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 ARMC5Q96C12 935 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 CARS2Q9HA77 564 aaKnown RBP12.2□□□□□ -0.46
RETREG3-201ENST00000309428 ACOT13Q9NPJ3 140 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 NECTIN3Q9NQS3 549 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 MAT2BQ9NZL9 334 aa12.2□□□□□ -0.46
RETREG3-201ENST00000309428 KIAA1522Q9P206 1035 aaPredicted RBP12.2□□□□□ -0.46
RETREG3-201ENST00000309428 GREB1Q4ZG55 1949 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 FGF18O76093 207 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 TOXO94900 526 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 TALDO1P37837 337 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 SOX3P41225 446 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 AKR1D1P51857 326 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 CTSCP53634 463 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 GNG2P59768 71 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 MC1RQ01726 317 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 FNDC3BQ53EP0 1204 aaKnown RBP12.19□□□□□ -0.46
RETREG3-201ENST00000309428 ZNF362Q5T0B9 420 aaPredicted RBP12.19□□□□□ -0.46
RETREG3-201ENST00000309428 PAMR1Q6UXH9 720 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 ALDH16A1Q8IZ83 802 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 LRRC20Q8TCA0 184 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 TMCO6Q96DC7 493 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 KLF16Q9BXK1 252 aaPredicted RBP12.19□□□□□ -0.46
RETREG3-201ENST00000309428 CD244Q9BZW8 370 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 RANGRFQ9HD47 186 aaPredicted RBP12.19□□□□□ -0.46
RETREG3-201ENST00000309428 SNX7Q9UNH6 387 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 PDCD11Q14690 1871 aaKnown RBP12.19□□□□□ -0.46
RETREG3-201ENST00000309428 GLOD5A6NK44 160 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 DLGAP1O14490 977 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 SSX4O60224 188 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 FCER2P06734 321 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 SRCP12931 536 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 DDX5P17844 614 aaKnown RBP12.19□□□□□ -0.46
RETREG3-201ENST00000309428 OLR1P78380 273 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 IFITM3Q01628 133 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 OR9Q2Q8NGE9 314 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 YIPF4Q9BSR8 244 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 EMILIN2Q9BXX0 1053 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 ACPTQ9BZG2 426 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 ING3Q9NXR8 418 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 TBC1D3BA6NDS4 549 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 AGAP5A6NIR3 686 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 AP3D1O14617 1153 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 YES1P07947 543 aa12.19□□□□□ -0.46
RETREG3-201ENST00000309428 C7P10643 843 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms