RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 TUBA4AP68366 448 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 ACAP2Q15057 778 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 KLHL38Q2WGJ6 581 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 TTLL9Q3SXZ7 439 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 ACSBG2Q5FVE4 666 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 PAQR3Q6TCH7 311 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 CYHR1Q6ZMK1 362 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 TMEM26Q6ZUK4 368 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 EFL1Q7Z2Z2 1120 aaKnown RBP7.92□□□□□ -1.14
CHD6-201ENST00000309279 SLCO6A1Q86UG4 719 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 RASGRP3Q8IV61 690 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 RNF152Q8N8N0 203 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 SIDT2Q8NBJ9 832 aaKnown RBP7.92□□□□□ -1.14
CHD6-201ENST00000309279 OR52M1Q8NGK5 317 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 OR5K2Q8NHB8 316 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 ZNF566Q969W8 418 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 FAM136AQ96C01 138 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 CXorf40BQ96DE9 158 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 ATXN7L3BQ96GX2 97 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 C12orf66Q96MD2 445 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 FAM111AQ96PZ2 611 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 SECISBP2Q96T21 854 aaKnown RBP7.92□□□□□ -1.14
CHD6-201ENST00000309279 PKP4Q99569 1192 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 OLFM1Q99784 485 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 NTN4Q9HB63 628 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 POPDC3Q9HBV1 291 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 IMP3Q9NV31 184 aaKnown RBP7.92□□□□□ -1.14
CHD6-201ENST00000309279 ERVK-19Q9WJR5 959 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 MTO1Q9Y2Z2 717 aaKnown RBP7.92□□□□□ -1.14
CHD6-201ENST00000309279 CFAP20Q9Y6A4 193 aaKnown RBP7.92□□□□□ -1.14
CHD6-201ENST00000309279 COLEC10Q9Y6Z7 277 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 CACNA1AO00555 2505 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 ANKRD12Q6UB98 2062 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 ASPMQ8IZT6 3477 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 COL27A1Q8IZC6 1860 aaPredicted RBP7.92□□□□□ -1.14
CHD6-201ENST00000309279 PRAMEF33A0A0G2JMD5 474 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 SPAARA0A1B0GVQ0 90 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 hCG_1809904A0A1W2PP81 198 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 A0A1W2PPE2 198 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 A0A1W2PR64 198 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 LILRA5A6NI73 299 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 GOLGA6L10A6NI86 522 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 GFYI3L273 518 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 NTN3O00634 580 aaPredicted RBP7.92□□□□□ -1.14
CHD6-201ENST00000309279 TO15178 435 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 CTIFO43310 598 aaKnown RBP7.92□□□□□ -1.14
CHD6-201ENST00000309279 B4GAT1O43505 415 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 CYTIPO60759 359 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 SCAF4O95104 1147 aaKnown RBP7.92□□□□□ -1.14
CHD6-201ENST00000309279 TSPAN12O95859 305 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 TPOP07202 933 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 FTH1P19P0C7X4 201 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 GCAP28676 217 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 CSRP3P50461 194 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 PRRX1P54821 245 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 GPLD1P80108 840 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 SIM1P81133 766 aaPredicted RBP7.92□□□□□ -1.14
CHD6-201ENST00000309279 E2F1Q01094 437 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 UAP1Q16222 522 aaPredicted RBP7.92□□□□□ -1.14
CHD6-201ENST00000309279 TMTC4Q5T4D3 741 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 LRRC8EQ6NSJ5 796 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 TUBA3EQ6PEY2 450 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 TMEM207Q6UWW9 146 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 SPRED1Q7Z699 444 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 PIM3Q86V86 326 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 TRIM48Q8IWZ4 208 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 CPNE9Q8IYJ1 553 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 MREGQ8N565 214 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 ELMO2Q96JJ3 720 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 PAFAH2Q99487 392 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 SLC38A3Q99624 504 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 CCDC3Q9BQI4 270 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 EPB41L1Q9H4G0 881 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 KIR3DX1Q9H7L2 352 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 REV1Q9UBZ9 1251 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 TRPS1Q9UHF7 1281 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 SLC24A2Q9UI40 661 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 TRMT6Q9UJA5 497 aaKnown RBP7.92□□□□□ -1.14
CHD6-201ENST00000309279 ASF1AQ9Y294 204 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 DMRT1Q9Y5R6 373 aa7.92□□□□□ -1.14
CHD6-201ENST00000309279 PTPRBP23467 1997 aa7.91□□□□□ -1.14
CHD6-201ENST00000309279 PCM1Q15154 2024 aa7.91□□□□□ -1.14
CHD6-201ENST00000309279 IGHV1OR21-1A0A087WYE8 117 aa7.91□□□□□ -1.14
CHD6-201ENST00000309279 EXOC1LA0A1B0GW35 172 aa7.91□□□□□ -1.14
CHD6-201ENST00000309279 A0A1W2PQM1 296 aa7.91□□□□□ -1.14
CHD6-201ENST00000309279 ZSCAN5BA6NJL1 495 aa7.91□□□□□ -1.14
CHD6-201ENST00000309279 PSIP1O75475 530 aaKnown RBP7.91□□□□□ -1.14
CHD6-201ENST00000309279 CRTAPO75718 401 aaPredicted RBP7.91□□□□□ -1.14
CHD6-201ENST00000309279 TSPAN9O75954 239 aa7.91□□□□□ -1.14
CHD6-201ENST00000309279 C1orf105O95561 183 aa7.91□□□□□ -1.14
CHD6-201ENST00000309279 CLPTM1O96005 669 aa7.91□□□□□ -1.14
CHD6-201ENST00000309279 RPN2P04844 631 aa7.91□□□□□ -1.14
CHD6-201ENST00000309279 CSF1P09603 554 aa7.91□□□□□ -1.14
CHD6-201ENST00000309279 NUDT17P0C025 328 aa7.91□□□□□ -1.14
CHD6-201ENST00000309279 MPC1LP0DKB6 136 aa7.91□□□□□ -1.14
CHD6-201ENST00000309279 JUPP14923 745 aa7.91□□□□□ -1.14
CHD6-201ENST00000309279 ANPEPP15144 967 aa7.91□□□□□ -1.14
CHD6-201ENST00000309279 ZNF37AP17032 561 aaPredicted RBP7.91□□□□□ -1.14
CHD6-201ENST00000309279 HSD17B3P37058 310 aa7.91□□□□□ -1.14
CHD6-201ENST00000309279 SERPINB9P50453 376 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms