RNA–Protein interactions for RNA: ENST00000309096.4

GPBP1-202, Transcript of GC-rich promoter binding protein 1, humanhuman

TSL 2

Gene GPBP1, Length 1,385 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-202ENST00000309096 FOXN4Q96NZ1 517 aa3.61□□□□□ -1.83
GPBP1-202ENST00000309096 CITED2Q99967 270 aaPredicted RBP3.61□□□□□ -1.83
GPBP1-202ENST00000309096 RPP25Q9BUL9 199 aaKnown RBP3.61□□□□□ -1.83
GPBP1-202ENST00000309096 MINDY3Q9H8M7 445 aa3.61□□□□□ -1.83
GPBP1-202ENST00000309096 NRBP1Q9UHY1 535 aa3.61□□□□□ -1.83
GPBP1-202ENST00000309096 GMEB2Q9UKD1 530 aa3.61□□□□□ -1.83
GPBP1-202ENST00000309096 ITGA11Q9UKX5 1188 aa3.61□□□□□ -1.83
GPBP1-202ENST00000309096 A0A1W2PPR1 153 aa3.6□□□□□ -1.83
GPBP1-202ENST00000309096 PSMA7O14818 248 aa3.6□□□□□ -1.83
GPBP1-202ENST00000309096 SNAP91O60641 907 aa3.6□□□□□ -1.83
GPBP1-202ENST00000309096 RAD51DO75771 328 aa3.6□□□□□ -1.83
GPBP1-202ENST00000309096 GRAP2O75791 330 aa3.6□□□□□ -1.83
GPBP1-202ENST00000309096 RLN1P04808 185 aa3.6□□□□□ -1.83
GPBP1-202ENST00000309096 PCP11498 1178 aaKnown RBP3.6□□□□□ -1.83
GPBP1-202ENST00000309096 PSMB4P28070 264 aa3.6□□□□□ -1.83
GPBP1-202ENST00000309096 TIA1P31483 386 aaKnown RBP eCLIP3.6□□□□□ -1.83
GPBP1-202ENST00000309096 RPL9P32969 192 aaKnown RBP3.6□□□□□ -1.83
GPBP1-202ENST00000309096 SLC1A3P43003 542 aa3.6□□□□□ -1.83
GPBP1-202ENST00000309096 PTENP60484 403 aa3.6□□□□□ -1.83
GPBP1-202ENST00000309096 RPP38P78345 283 aaKnown RBP3.6□□□□□ -1.83
GPBP1-202ENST00000309096 SRPXP78539 464 aa3.6□□□□□ -1.83
GPBP1-202ENST00000309096 ZNF146Q15072 292 aa3.6□□□□□ -1.83
GPBP1-202ENST00000309096 LBHQ53QV2 105 aaPredicted RBP3.6□□□□□ -1.83
GPBP1-202ENST00000309096 SPANXN4Q5MJ08 99 aa3.6□□□□□ -1.83
GPBP1-202ENST00000309096 SPINK14Q6IE38 97 aa3.6□□□□□ -1.83
GPBP1-202ENST00000309096 KLHL10Q6JEL2 608 aa3.6□□□□□ -1.83
GPBP1-202ENST00000309096 TRAT1Q6PIZ9 186 aa3.6□□□□□ -1.83
GPBP1-202ENST00000309096 TMEM182Q6ZP80 229 aaPredicted RBP3.6□□□□□ -1.83
GPBP1-202ENST00000309096 NME8Q8N427 588 aa3.6□□□□□ -1.83
GPBP1-202ENST00000309096 POM121L12Q8N7R1 296 aa3.6□□□□□ -1.83
GPBP1-202ENST00000309096 AFAP1L1Q8TED9 768 aa3.6□□□□□ -1.83
GPBP1-202ENST00000309096 CKAP2Q8WWK9 683 aa3.6□□□□□ -1.83
GPBP1-202ENST00000309096 ST6GALNAC6Q969X2 333 aa3.6□□□□□ -1.83
GPBP1-202ENST00000309096 PDLIM5Q96HC4 596 aaKnown RBP3.6□□□□□ -1.83
GPBP1-202ENST00000309096 VIPAS39Q9H9C1 493 aa3.6□□□□□ -1.83
GPBP1-202ENST00000309096 C3orf14Q9HBI5 128 aa3.6□□□□□ -1.83
GPBP1-202ENST00000309096 TMOD3Q9NYL9 352 aa3.6□□□□□ -1.83
GPBP1-202ENST00000309096 PLCL2Q9UPR0 1127 aa3.6□□□□□ -1.83
GPBP1-202ENST00000309096 ZNF510Q9Y2H8 683 aa3.6□□□□□ -1.83
GPBP1-202ENST00000309096 MRPS18CQ9Y3D5 142 aaKnown RBP3.6□□□□□ -1.83
GPBP1-202ENST00000309096 IGHV3-20A0A0C4DH32 117 aa3.59□□□□□ -1.83
GPBP1-202ENST00000309096 IGHV3-38A0A0C4DH36 116 aa3.59□□□□□ -1.83
GPBP1-202ENST00000309096 ACOD1A6NK06 481 aa3.59□□□□□ -1.83
GPBP1-202ENST00000309096 YDJCA8MPS7 323 aa3.59□□□□□ -1.83
GPBP1-202ENST00000309096 KBTBD13C9JR72 458 aa3.59□□□□□ -1.83
GPBP1-202ENST00000309096 OGTO15294 1046 aa3.59□□□□□ -1.83
GPBP1-202ENST00000309096 HSPA4LO95757 839 aa3.59□□□□□ -1.83
GPBP1-202ENST00000309096 ADORA3P0DMS8 318 aa3.59□□□□□ -1.83
GPBP1-202ENST00000309096 FCGR2BP31994 310 aaPredicted RBP3.59□□□□□ -1.83
GPBP1-202ENST00000309096 FCGR2CP31995 323 aa3.59□□□□□ -1.83
GPBP1-202ENST00000309096 PRKCIP41743 596 aa3.59□□□□□ -1.83
GPBP1-202ENST00000309096 IER3P46695 156 aa3.59□□□□□ -1.83
GPBP1-202ENST00000309096 RIDAP52758 137 aaKnown RBP3.59□□□□□ -1.83
GPBP1-202ENST00000309096 RBP5P82980 135 aa3.59□□□□□ -1.83
GPBP1-202ENST00000309096 TSPY1Q01534 308 aa3.59□□□□□ -1.83
GPBP1-202ENST00000309096 ABRQ12979 859 aa3.59□□□□□ -1.83
GPBP1-202ENST00000309096 TCTEX1D4Q5JR98 221 aa3.59□□□□□ -1.83
GPBP1-202ENST00000309096 LCE3CQ5T5A8 94 aa3.59□□□□□ -1.83
GPBP1-202ENST00000309096 CAVIN1Q6NZI2 390 aaKnown RBP3.59□□□□□ -1.83
GPBP1-202ENST00000309096 SLC27A4Q6P1M0 643 aa3.59□□□□□ -1.83
GPBP1-202ENST00000309096 RFPL4BQ6ZWI9 263 aa3.59□□□□□ -1.83
GPBP1-202ENST00000309096 KLHL7Q8IXQ5 586 aa3.59□□□□□ -1.83
GPBP1-202ENST00000309096 ZNF444Q8N0Y2 327 aaPredicted RBP3.59□□□□□ -1.83
GPBP1-202ENST00000309096 SLC39A11Q8N1S5 342 aa3.59□□□□□ -1.83
GPBP1-202ENST00000309096 ELMOD1Q8N336 334 aa3.59□□□□□ -1.83
GPBP1-202ENST00000309096 ZNF597Q96LX8 424 aa3.59□□□□□ -1.83
GPBP1-202ENST00000309096 THUMPD3Q9BV44 507 aaKnown RBP3.59□□□□□ -1.83
GPBP1-202ENST00000309096 RBM24Q9BX46 236 aaKnown RBP3.59□□□□□ -1.83
GPBP1-202ENST00000309096 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.83
GPBP1-202ENST00000309096 STRADBQ9C0K7 418 aa3.59□□□□□ -1.83
GPBP1-202ENST00000309096 LSG1Q9H089 658 aaKnown RBP3.59□□□□□ -1.83
GPBP1-202ENST00000309096 SP140LQ9H930 580 aa3.59□□□□□ -1.83
GPBP1-202ENST00000309096 CHCHD3Q9NX63 227 aaKnown RBP3.59□□□□□ -1.83
GPBP1-202ENST00000309096 THAP10Q9P2Z0 257 aaPredicted RBP3.59□□□□□ -1.83
GPBP1-202ENST00000309096 PCDHGA1Q9Y5H4 931 aa3.59□□□□□ -1.83
GPBP1-202ENST00000309096 AUP1Q9Y679 476 aa3.59□□□□□ -1.83
GPBP1-202ENST00000309096 POMT1Q9Y6A1 747 aa3.59□□□□□ -1.83
GPBP1-202ENST00000309096 G3V2L1 256 aa3.58□□□□□ -1.84
GPBP1-202ENST00000309096 PDHXO00330 501 aa3.58□□□□□ -1.84
GPBP1-202ENST00000309096 SLC30A4O14863 429 aa3.58□□□□□ -1.84
GPBP1-202ENST00000309096 ANKRD34CP0C6C1 535 aa3.58□□□□□ -1.84
GPBP1-202ENST00000309096 EEF2P13639 858 aaKnown RBP3.58□□□□□ -1.84
GPBP1-202ENST00000309096 CAPN2P17655 700 aa3.58□□□□□ -1.84
GPBP1-202ENST00000309096 ZFP36L2P47974 494 aaKnown RBP3.58□□□□□ -1.84
GPBP1-202ENST00000309096 CRYBA2P53672 197 aa3.58□□□□□ -1.84
GPBP1-202ENST00000309096 BFSP1Q12934 665 aa3.58□□□□□ -1.84
GPBP1-202ENST00000309096 MAPK11Q15759 364 aa3.58□□□□□ -1.84
GPBP1-202ENST00000309096 LRRC37A5PQ49AS3 106 aa3.58□□□□□ -1.84
GPBP1-202ENST00000309096 ZNF841Q6ZN19 808 aa3.58□□□□□ -1.84
GPBP1-202ENST00000309096 Q6ZVQ6 151 aa3.58□□□□□ -1.84
GPBP1-202ENST00000309096 TMUB2Q71RG4 321 aa3.58□□□□□ -1.84
GPBP1-202ENST00000309096 SLC47A2Q86VL8 602 aa3.58□□□□□ -1.84
GPBP1-202ENST00000309096 SIX6OS1Q8N1H7 587 aa3.58□□□□□ -1.84
GPBP1-202ENST00000309096 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.58□□□□□ -1.84
GPBP1-202ENST00000309096 EXOC4Q96A65 974 aa3.58□□□□□ -1.84
GPBP1-202ENST00000309096 SGF29Q96ES7 293 aa3.58□□□□□ -1.84
GPBP1-202ENST00000309096 ZMAT2Q96NC0 199 aaKnown RBP3.58□□□□□ -1.84
GPBP1-202ENST00000309096 INTS14Q96SY0 518 aa3.58□□□□□ -1.84
GPBP1-202ENST00000309096 HNRNPABQ99729 332 aaKnown RBP3.58□□□□□ -1.84
GPBP1-202ENST00000309096 C17orf62Q9BQA9 187 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms