RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 A0A1W2PPL8 197 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 FAM155AB1AL88 458 aaPredicted RBP10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 PGRMC2O15173 223 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 WBP4O75554 376 aaKnown RBP10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 AHSA1O95433 338 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 FADS2O95864 444 aaKnown RBP10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 MNDAP41218 407 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 PPP2R2BQ00005 443 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 TUBB3Q13509 450 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 SHISA6Q6ZSJ9 500 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 ULBP3Q9BZM4 244 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 GAREM1Q9H706 876 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 SPATA2Q9UM82 520 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 CASKO14936 926 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 ITM2AO43736 263 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 DGKQP52824 942 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 SCAPQ12770 1279 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 CARD17Q5XLA6 110 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 C15orf39Q6ZRI6 1047 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 SFRP1Q8N474 314 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 TMEM234Q8WY98 164 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 NAT6Q93015 286 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 ZSWIM3Q96MP5 696 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 TBX5Q99593 518 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 TMEM138Q9NPI0 162 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 STARD5Q9NSY2 213 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 HSFX1Q9UBD0 423 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 ZDHHC2Q9UIJ5 367 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 CA5BQ9Y2D0 317 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 SMCHD1A6NHR9 2005 aa10.32□□□□□ -0.76
SYNPO2-201ENST00000307142 PTNP21246 168 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 C1orf220Q5T0J3 134 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 NPWQ8N729 165 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 ARL10Q8N8L6 244 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 NAXEQ8NCW5 288 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 NLGN4YQ8NFZ3 816 aaPredicted RBP10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 DIO2Q92813 273 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 NDUFA13Q9P0J0 144 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 CDH22Q9UJ99 828 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 TMEM233B4DJY2 109 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 PLD2O14939 933 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 NIPAL4Q0D2K0 466 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 DUSP6Q16828 381 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 DCAF12Q5T6F0 453 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 OR4C11Q6IEV9 310 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 RNF130Q86XS8 419 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 FATE1Q969F0 183 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 ORAI3Q9BRQ5 295 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 A0A1W2PRG6 482 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 NPIPB15A6NHN6 443 aaPredicted RBP10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 PDYNP01213 254 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 AK4P27144 223 aaPredicted RBP10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 CDK9P50750 372 aaKnown RBP10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 RAB14P61106 215 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 CDK3Q00526 305 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 MGAT3Q09327 533 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 MSS51Q4VC12 460 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 CATSPEREQ5SY80 951 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 CCDC54Q8NEL0 328 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 NUP43Q8NFH3 380 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 RPF2Q9H7B2 306 aaKnown RBP10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 ZBTB20Q9HC78 741 aaPredicted RBP10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 MARCH5Q9NX47 278 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 DNMT3AQ9Y6K1 912 aaPredicted RBP10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 NXPE4Q6UWF7 544 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 TMEM107Q6UX40 140 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 TMIEQ8NEW7 156 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 AP3S1Q92572 193 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 CLPTM1LQ96KA5 538 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 TMEM74Q96NL1 305 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 FCRL3Q96P31 734 aaPredicted RBP10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 WDR45Q9Y484 360 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 GPC6Q9Y625 555 aaPredicted RBP10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 OPN1SWP03999 348 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 STAT5AP42229 794 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 ACVR1CQ8NER5 493 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 OR7A2PQ8NGA2 310 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 CRYGNQ8WXF5 182 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 PKP4Q99569 1192 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 PDCD10Q9BUL8 212 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 DSN1Q9H410 356 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 GRHPRQ9UBQ7 328 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 FETUBQ9UGM5 382 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 KRT36O76013 467 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 DBTP11182 482 aaKnown RBP10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 CBX5P45973 191 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 SHC2P98077 582 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 MRPL49Q13405 166 aaKnown RBP10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 RNASE12Q5GAN4 147 aaKnown RBP10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 C9orf50Q5SZB4 431 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 C7orf57Q8NEG2 295 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 TTYH1Q9H313 450 aaPredicted RBP10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 POPDC3Q9HBV1 291 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 TVP23BQ9NYZ1 205 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 ACTR10Q9NZ32 417 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 ANKRD31Q8N7Z5 1873 aa10.31□□□□□ -0.76
SYNPO2-201ENST00000307142 NR2C1P13056 603 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 CAPGP40121 348 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 IL12RB1P42701 662 aa10.3□□□□□ -0.76
SYNPO2-201ENST00000307142 FNTBP49356 437 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms