RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 KLHL18O94889 574 aa21.2■□□□□ 0.98
HOXD4-201ENST00000306324 NSA2O95478 260 aaKnown RBP21.2■□□□□ 0.98
HOXD4-201ENST00000306324 CHRNGP07510 517 aa21.2■□□□□ 0.98
HOXD4-201ENST00000306324 PLA2G16P53816 162 aa21.2■□□□□ 0.98
HOXD4-201ENST00000306324 DNASE1L3Q13609 305 aa21.2■□□□□ 0.98
HOXD4-201ENST00000306324 TCHHL1Q5QJ38 904 aaPredicted RBP21.2■□□□□ 0.98
HOXD4-201ENST00000306324 TRIM40Q6P9F5 258 aa21.2■□□□□ 0.98
HOXD4-201ENST00000306324 CHSY3Q70JA7 882 aa21.2■□□□□ 0.98
HOXD4-201ENST00000306324 PDSS2Q86YH6 399 aa21.2■□□□□ 0.98
HOXD4-201ENST00000306324 AFAP1L2Q8N4X5 818 aa21.2■□□□□ 0.98
HOXD4-201ENST00000306324 SELENOMQ8WWX9 145 aa21.2■□□□□ 0.98
HOXD4-201ENST00000306324 FAR2Q96K12 515 aa21.2■□□□□ 0.98
HOXD4-201ENST00000306324 C17orf62Q9BQA9 187 aa21.2■□□□□ 0.98
HOXD4-201ENST00000306324 OR51B5Q9H339 312 aa21.2■□□□□ 0.98
HOXD4-201ENST00000306324 SLC22A11Q9NSA0 550 aa21.2■□□□□ 0.98
HOXD4-201ENST00000306324 FARSBQ9NSD9 589 aaKnown RBP21.2■□□□□ 0.98
HOXD4-201ENST00000306324 TIMM22Q9Y584 194 aa21.2■□□□□ 0.98
HOXD4-201ENST00000306324 C21orf140B9A014 251 aa21.19■□□□□ 0.98
HOXD4-201ENST00000306324 H0YIG0 161 aa21.19■□□□□ 0.98
HOXD4-201ENST00000306324 H3BQF6 201 aa21.19■□□□□ 0.98
HOXD4-201ENST00000306324 SAP18O00422 153 aaKnown RBP21.19■□□□□ 0.98
HOXD4-201ENST00000306324 KRT6AP02538 564 aa21.19■□□□□ 0.98
HOXD4-201ENST00000306324 KRT6BP04259 564 aa21.19■□□□□ 0.98
HOXD4-201ENST00000306324 BGNP21810 368 aa21.19■□□□□ 0.98
HOXD4-201ENST00000306324 F8A1P23610 371 aa21.19■□□□□ 0.98
HOXD4-201ENST00000306324 KRT6CP48668 564 aa21.19■□□□□ 0.98
HOXD4-201ENST00000306324 FOXA1P55317 472 aa21.19■□□□□ 0.98
HOXD4-201ENST00000306324 RPS15P62841 145 aaKnown RBP21.19■□□□□ 0.98
HOXD4-201ENST00000306324 SKP1P63208 163 aa21.19■□□□□ 0.98
HOXD4-201ENST00000306324 NCF4Q15080 339 aa21.19■□□□□ 0.98
HOXD4-201ENST00000306324 ADPRMQ3LIE5 342 aa21.19■□□□□ 0.98
HOXD4-201ENST00000306324 ARL13AQ5H913 290 aaPredicted RBP21.19■□□□□ 0.98
HOXD4-201ENST00000306324 KHDRBS2Q5VWX1 349 aaKnown RBP21.19■□□□□ 0.98
HOXD4-201ENST00000306324 COX15Q7KZN9 410 aa21.19■□□□□ 0.98
HOXD4-201ENST00000306324 CUZD1Q86UP6 607 aa21.19■□□□□ 0.98
HOXD4-201ENST00000306324 ENDOVQ8N8Q3 282 aaKnown RBP21.19■□□□□ 0.98
HOXD4-201ENST00000306324 OR2L5Q8NG80 312 aa21.19■□□□□ 0.98
HOXD4-201ENST00000306324 CCNL2Q96S94 520 aaPredicted RBP21.19■□□□□ 0.98
HOXD4-201ENST00000306324 HBEGFQ99075 208 aa21.19■□□□□ 0.98
HOXD4-201ENST00000306324 EML4Q9HC35 981 aaKnown RBP21.19■□□□□ 0.98
HOXD4-201ENST00000306324 TNFRSF12AQ9NP84 129 aa21.19■□□□□ 0.98
HOXD4-201ENST00000306324 IL17BQ9UHF5 180 aa21.19■□□□□ 0.98
HOXD4-201ENST00000306324 KCND3Q9UK17 655 aa21.19■□□□□ 0.98
HOXD4-201ENST00000306324 ZMIZ1Q9ULJ6 1067 aa21.19■□□□□ 0.98
HOXD4-201ENST00000306324 ZZEF1O43149 2961 aa21.18■□□□□ 0.98
HOXD4-201ENST00000306324 FOXE1O00358 373 aaPredicted RBP21.18■□□□□ 0.98
HOXD4-201ENST00000306324 MANBAO00462 879 aa21.18■□□□□ 0.98
HOXD4-201ENST00000306324 GALR3O60755 368 aaPredicted RBP21.18■□□□□ 0.98
HOXD4-201ENST00000306324 RDH16O75452 317 aa21.18■□□□□ 0.98
HOXD4-201ENST00000306324 PDYNP01213 254 aa21.18■□□□□ 0.98
HOXD4-201ENST00000306324 SMIM10L1P0DMW3 83 aa21.18■□□□□ 0.98
HOXD4-201ENST00000306324 PTX3P26022 381 aaPredicted RBP21.18■□□□□ 0.98
HOXD4-201ENST00000306324 SERPINB5P36952 375 aa21.18■□□□□ 0.98
HOXD4-201ENST00000306324 BTN3A2P78410 334 aa21.18■□□□□ 0.98
HOXD4-201ENST00000306324 MAT1AQ00266 395 aaKnown RBP21.18■□□□□ 0.98
HOXD4-201ENST00000306324 TGM3Q08188 693 aa21.18■□□□□ 0.98
HOXD4-201ENST00000306324 DSG2Q14126 1118 aa21.18■□□□□ 0.98
HOXD4-201ENST00000306324 SYT16Q17RD7 645 aa21.18■□□□□ 0.98
HOXD4-201ENST00000306324 C10orf62Q5T681 223 aaPredicted RBP21.18■□□□□ 0.98
HOXD4-201ENST00000306324 AMER3Q8N944 861 aa21.18■□□□□ 0.98
HOXD4-201ENST00000306324 SMIM10Q96HG1 83 aa21.18■□□□□ 0.98
HOXD4-201ENST00000306324 CENPKQ9BS16 269 aa21.18■□□□□ 0.98
HOXD4-201ENST00000306324 HCN3Q9P1Z3 774 aa21.18■□□□□ 0.98
HOXD4-201ENST00000306324 TRPC4Q9UBN4 977 aa21.18■□□□□ 0.98
HOXD4-201ENST00000306324 CTSFQ9UBX1 484 aa21.18■□□□□ 0.98
HOXD4-201ENST00000306324 FARSAQ9Y285 508 aaKnown RBP21.18■□□□□ 0.98
HOXD4-201ENST00000306324 FIS1Q9Y3D6 152 aa21.18■□□□□ 0.98
HOXD4-201ENST00000306324 MRPS18BQ9Y676 258 aaKnown RBP21.18■□□□□ 0.98
HOXD4-201ENST00000306324 ULK1O75385 1050 aa21.17■□□□□ 0.98
HOXD4-201ENST00000306324 ONECUT2O95948 504 aa21.17■□□□□ 0.98
HOXD4-201ENST00000306324 SERPINE1P05121 402 aa21.17■□□□□ 0.98
HOXD4-201ENST00000306324 ITPKBP27987 946 aa21.17■□□□□ 0.98
HOXD4-201ENST00000306324 RAP1GDS1P52306 607 aa21.17■□□□□ 0.98
HOXD4-201ENST00000306324 RPS18P62269 152 aaKnown RBP21.17■□□□□ 0.98
HOXD4-201ENST00000306324 TMEM35AQ53FP2 167 aa21.17■□□□□ 0.98
HOXD4-201ENST00000306324 DEPDC1Q5TB30 811 aa21.17■□□□□ 0.98
HOXD4-201ENST00000306324 BROXQ5VW32 411 aa21.17■□□□□ 0.98
HOXD4-201ENST00000306324 NIPAL1Q6NVV3 410 aa21.17■□□□□ 0.98
HOXD4-201ENST00000306324 OVCH1Q7RTY7 1134 aa21.17■□□□□ 0.98
HOXD4-201ENST00000306324 SRFBP1Q8NEF9 429 aaKnown RBP21.17■□□□□ 0.98
HOXD4-201ENST00000306324 OR6Y1Q8NGX8 325 aa21.17■□□□□ 0.98
HOXD4-201ENST00000306324 FKBP10Q96AY3 582 aa21.17■□□□□ 0.98
HOXD4-201ENST00000306324 EFHD1Q9BUP0 239 aa21.17■□□□□ 0.98
HOXD4-201ENST00000306324 GPR87Q9BY21 358 aa21.17■□□□□ 0.98
HOXD4-201ENST00000306324 COPS7BQ9H9Q2 264 aaPredicted RBP21.17■□□□□ 0.98
HOXD4-201ENST00000306324 A0A087WV48 116 aa21.16■□□□□ 0.98
HOXD4-201ENST00000306324 A0A088AWK7 358 aa21.16■□□□□ 0.98
HOXD4-201ENST00000306324 TERTO14746 1132 aaKnown RBP21.16■□□□□ 0.98
HOXD4-201ENST00000306324 ATP8B1O43520 1251 aa21.16■□□□□ 0.98
HOXD4-201ENST00000306324 ETHE1O95571 254 aa21.16■□□□□ 0.98
HOXD4-201ENST00000306324 RAB40ALP0C0E4 278 aa21.16■□□□□ 0.98
HOXD4-201ENST00000306324 ZNF10P21506 573 aaPredicted RBP21.16■□□□□ 0.98
HOXD4-201ENST00000306324 SERPINB3P29508 390 aa21.16■□□□□ 0.98
HOXD4-201ENST00000306324 HTR6P50406 440 aa21.16■□□□□ 0.98
HOXD4-201ENST00000306324 PPP2R2AP63151 447 aa21.16■□□□□ 0.98
HOXD4-201ENST00000306324 OLR1P78380 273 aa21.16■□□□□ 0.98
HOXD4-201ENST00000306324 OCA2Q04671 838 aa21.16■□□□□ 0.98
HOXD4-201ENST00000306324 TLE3Q04726 772 aa21.16■□□□□ 0.98
HOXD4-201ENST00000306324 GALNT1Q10472 559 aaPredicted RBP21.16■□□□□ 0.98
HOXD4-201ENST00000306324 HSP90B2PQ58FF3 399 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms