RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 PRAMEF13Q5VWM6 474 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 LIPJQ5W064 366 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 APCDD1Q8J025 514 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 OR10H4Q8NGA5 316 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 ZSCAN5AQ9BUG6 496 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 ABCG2Q9UNQ0 655 aa12.81□□□□□ -0.36
DDX54-201ENST00000306014 TARM1B6A8C7 271 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 LAMP2P13473 410 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 ZNF691Q5VV52 312 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 REEP3Q6NUK4 255 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 TMIGD1Q6UXZ0 262 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 DPY19L3Q6ZPD9 716 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 MARCH9Q86YJ5 346 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 FAM217AQ8IXS0 508 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 FAM86B1Q8N7N1 296 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 TMED9Q9BVK6 235 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 TRMT61BQ9BVS5 477 aaKnown RBP12.8□□□□□ -0.36
DDX54-201ENST00000306014 ACPTQ9BZG2 426 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 TBC1D14Q9P2M4 693 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 HTR3EA5X5Y0 456 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 DRGXA6NNA5 263 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 M0R129 80 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 TPD52L2O43399 206 aaKnown RBP12.8□□□□□ -0.36
DDX54-201ENST00000306014 TSPAN6O43657 245 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 PRNPP04156 253 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 STAT5AP42229 794 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 NCBP2P52298 156 aaKnown RBP eCLIP12.8□□□□□ -0.36
DDX54-201ENST00000306014 PCDH1Q08174 1060 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 SP140Q13342 867 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 MAD2L1BPQ15013 274 aaPredicted RBP12.8□□□□□ -0.36
DDX54-201ENST00000306014 PLPP4Q5VZY2 271 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 OTOP2Q7RTS6 562 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 ZNF433Q8N7K0 673 aaPredicted RBP12.8□□□□□ -0.36
DDX54-201ENST00000306014 ZNF548Q8NEK5 533 aaPredicted RBP12.8□□□□□ -0.36
DDX54-201ENST00000306014 CHPT1Q8WUD6 406 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 SLC39A13Q96H72 371 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 SLC7A5P2Q9GIP4 190 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 TMEM45AQ9NWC5 275 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 GJD2Q9UKL4 321 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 I6L893 689 aaPredicted RBP12.8□□□□□ -0.36
DDX54-201ENST00000306014 PCCBP05166 539 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 SRPRAP08240 638 aaKnown RBP12.8□□□□□ -0.36
DDX54-201ENST00000306014 ZNF10P21506 573 aaPredicted RBP12.8□□□□□ -0.36
DDX54-201ENST00000306014 TM4SF4P48230 202 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 DGKGP49619 791 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 ABATP80404 500 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 KCNC4Q03721 635 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 BRAT1Q6PJG6 821 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 ZNF367Q7RTV3 350 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 B3GNT8Q7Z7M8 397 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 GPR149Q86SP6 731 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 PTRH1Q86Y79 214 aaKnown RBP12.8□□□□□ -0.36
DDX54-201ENST00000306014 SLC7A5P1Q8MH63 180 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 GHDCQ8N2G8 530 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 KLHDC9Q8NEP7 349 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 SUN5Q8TC36 379 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 ING5Q8WYH8 240 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 FRMD6Q96NE9 622 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 TAS2R9Q9NYW1 312 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 SEC14L4Q9UDX3 406 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 SARDHQ9UL12 918 aa12.8□□□□□ -0.36
DDX54-201ENST00000306014 CLCA1A8K7I4 914 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 DYRK3O43781 588 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 DNTTP04053 509 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 LAG3P18627 525 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 PIGAP37287 484 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 PIK3CBP42338 1070 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 WASP42768 502 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 RPL34P49207 117 aaKnown RBP12.79□□□□□ -0.36
DDX54-201ENST00000306014 ARL4DP49703 201 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 RPS26P62854 115 aaKnown RBP12.79□□□□□ -0.36
DDX54-201ENST00000306014 TRIM71Q2Q1W2 868 aaKnown RBP12.79□□□□□ -0.36
DDX54-201ENST00000306014 PLEKHS1Q5SXH7 462 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 CHPFQ8IZ52 775 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 TRIB3Q96RU7 358 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 CPNE5Q9HCH3 593 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 IL1RAPQ9NPH3 570 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 TAC3Q9UHF0 121 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 ERVK-11Q9UQG0 969 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 CCDC85CA6NKD9 419 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 KHDRBS3O75525 346 aaKnown RBP12.79□□□□□ -0.36
DDX54-201ENST00000306014 FUCA1P04066 466 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 TIA1P31483 386 aaKnown RBP eCLIP12.79□□□□□ -0.36
DDX54-201ENST00000306014 ETV3P41162 512 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 NR4A2P43354 598 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 PRR5P85299 388 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 LMAN2Q12907 356 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 FAM180BQ6P0A1 224 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 SLC30A8Q8IWU4 369 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 NAGSQ8N159 534 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 FAM98AQ8NCA5 519 aaKnown RBP12.79□□□□□ -0.36
DDX54-201ENST00000306014 C7orf57Q8NEG2 295 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 TRPV1Q8NER1 839 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 NARS2Q96I59 477 aaKnown RBP12.79□□□□□ -0.36
DDX54-201ENST00000306014 PIP5K1AQ99755 562 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 KCNN2Q9H2S1 579 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 TMEM138Q9NPI0 162 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 DEC1Q9P2X7 70 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 P2RX2Q9UBL9 471 aa12.79□□□□□ -0.36
DDX54-201ENST00000306014 CMAHPQ9Y471 501 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms