RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 LRRC23Q53EV4 343 aaPredicted RBP6.26□□□□□ -1.41
USP47-201ENST00000305481 USP51Q70EK9 711 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 STK32CQ86UX6 486 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 AMER3Q8N944 861 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 OR2L8Q8NGY9 312 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 CCL4L1Q8NHW4 92 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 CREB3L4Q8TEY5 395 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 PPCDCQ96CD2 204 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 TM4SF18Q96CE8 201 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 ABHD8Q96I13 439 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 TMEM121BQ9BXQ6 578 aaPredicted RBP6.26□□□□□ -1.41
USP47-201ENST00000305481 SLC6A16Q9GZN6 736 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 TTYH1Q9H313 450 aaPredicted RBP6.26□□□□□ -1.41
USP47-201ENST00000305481 NT5DC2Q9H857 520 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 SMURF2Q9HAU4 748 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 VNN3Q9NY84 501 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 VPS4AQ9UN37 437 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 CCDC85CA6NKD9 419 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 PDZK1P1A8MUH7 402 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 C10orf142B7Z368 130 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 AXIN1O15169 862 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 OR1F1O43749 312 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 KCNJ13O60928 360 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 OR6B1O95007 311 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 SEMA3DO95025 777 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 ZNF682O95780 498 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 CLPTM1O96005 669 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 ASGR2P07307 311 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 HOXC4P09017 264 aaPredicted RBP6.25□□□□□ -1.41
USP47-201ENST00000305481 PABPC4LP0CB38 370 aaKnown RBP6.25□□□□□ -1.41
USP47-201ENST00000305481 ATP6V1B1P15313 513 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 PRKACGP22612 351 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 ALDH3A2P51648 485 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 CCINQ13939 588 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 VEZF1Q14119 521 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 SPIDRQ14159 915 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 MAP7Q14244 749 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 CCNYL2Q5T2Q4 361 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 KIAA1324Q6UXG2 1013 aaKnown RBP6.25□□□□□ -1.41
USP47-201ENST00000305481 VTCN1Q7Z7D3 282 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 ZCCHC7Q8N3Z6 543 aaKnown RBP6.25□□□□□ -1.41
USP47-201ENST00000305481 ARL10Q8N8L6 244 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 CYGBQ8WWM9 190 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 JPH3Q8WXH2 748 aaPredicted RBP6.25□□□□□ -1.41
USP47-201ENST00000305481 UCN3Q969E3 161 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 YIPF3Q9GZM5 350 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 SLC6A20Q9NP91 592 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 LTB4R2Q9NPC1 389 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 SLAMF7Q9NQ25 335 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 SPHK1Q9NYA1 384 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 SPASTQ9UBP0 616 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 EBF1Q9UH73 591 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 ACSL6Q9UKU0 697 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 ABCG2Q9UNQ0 655 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 TMPRSS11DO60235 418 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 TNFRSF21O75509 655 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 GABRG2P18507 467 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 CXCR2P25025 360 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 AK4P27144 223 aaPredicted RBP6.25□□□□□ -1.41
USP47-201ENST00000305481 CAPGP40121 348 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 DCTP40126 519 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 KIAA1024LP59773 190 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 PPP2R2BQ00005 443 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 VAC14Q08AM6 782 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 DAG1Q14118 895 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 ZIK1Q3SY52 487 aaPredicted RBP6.25□□□□□ -1.41
USP47-201ENST00000305481 IQCCQ4KMZ1 466 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 KRT80Q6KB66 452 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 ERICH5Q6P6B1 374 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 ENPP7Q6UWV6 458 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 IKBIPQ70UQ0 350 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 R3HCC1LQ7Z5L2 792 aaKnown RBP6.25□□□□□ -1.41
USP47-201ENST00000305481 ZDHHC13Q8IUH4 622 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.25□□□□□ -1.41
USP47-201ENST00000305481 OFCC1Q8IZS5 231 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 EID3Q8N140 333 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 FBXL6Q8N531 539 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 DHRSXQ8N5I4 330 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 TSACCQ96A04 125 aaPredicted RBP6.25□□□□□ -1.41
USP47-201ENST00000305481 MTERF3Q96E29 417 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 BARD1Q99728 777 aaKnown RBP6.25□□□□□ -1.41
USP47-201ENST00000305481 MACROD1Q9BQ69 325 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 OSBPL10Q9BXB5 764 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 MRPS26Q9BYN8 205 aaKnown RBP6.25□□□□□ -1.41
USP47-201ENST00000305481 FAM192AQ9GZU8 254 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 KLHL31Q9H511 634 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 C8orf33Q9H7E9 229 aaPredicted RBP6.25□□□□□ -1.41
USP47-201ENST00000305481 MVB12BQ9H7P6 319 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 IL1RAPQ9NPH3 570 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 PNPLA3Q9NST1 481 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 ATAD3AQ9NVI7 634 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 ZNF282Q9UDV7 671 aaPredicted RBP6.25□□□□□ -1.41
USP47-201ENST00000305481 RAPGEFL1Q9UHV5 662 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 SAMD4AQ9UPU9 718 aaKnown RBP6.25□□□□□ -1.41
USP47-201ENST00000305481 NCKAP1Q9Y2A7 1128 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 SNRNP200O75643 2136 aaKnown RBP6.25□□□□□ -1.41
USP47-201ENST00000305481 MYO10Q9HD67 2058 aa6.25□□□□□ -1.41
USP47-201ENST00000305481 TCRBV21S2A2A0A5A6 115 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 ANKRD33BA6NCL7 494 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 TRIM64A6NGJ6 449 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms