RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 B3GALT4O96024 378 aa24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 CELA2AP08217 269 aa24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 ITGAMP11215 1152 aa24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 TSFMP43897 325 aaKnown RBP24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 UQCRFS1P47985 274 aa24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 KCNC1P48547 511 aa24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 ARG2P78540 354 aa24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 LAPTM5Q13571 262 aa24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 BMPR2Q13873 1038 aa24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 XKR6Q5GH73 641 aa24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 PAGE2BQ5JRK9 111 aa24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 CCT6BQ92526 530 aa24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 GAL3ST3Q96A11 431 aa24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 TRIM44Q96DX7 344 aaPredicted RBP24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 C19orf60Q96EN9 201 aa24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 WDR34Q96EX3 536 aa24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 FAR2Q96K12 515 aa24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 ATOH8Q96SQ7 321 aa24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 EFCAB11Q9BUY7 163 aa24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 FUT8Q9BYC5 575 aa24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 CDC42EP4Q9H3Q1 356 aaKnown RBP24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 SNX15Q9NRS6 342 aa24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 ASF1BQ9NVP2 202 aa24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 TEKT2Q9UIF3 430 aa24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 SCN3AQ9NY46 2000 aa24.9■■□□□ 1.58
CDKN2A-201ENST00000304494 A0A088AWK7 358 aa24.89■■□□□ 1.58
CDKN2A-201ENST00000304494 CLEC18AA5D8T8 446 aa24.89■■□□□ 1.58
CDKN2A-201ENST00000304494 TCP11X1B4DZS4 312 aa24.89■■□□□ 1.58
CDKN2A-201ENST00000304494 CLEC3AO75596 197 aa24.89■■□□□ 1.58
CDKN2A-201ENST00000304494 C2P06681 752 aa24.89■■□□□ 1.58
CDKN2A-201ENST00000304494 RNH1P13489 461 aaKnown RBP24.89■■□□□ 1.58
CDKN2A-201ENST00000304494 ZNF10P21506 573 aaPredicted RBP24.89■■□□□ 1.58
CDKN2A-201ENST00000304494 GMPRP36959 345 aa24.89■■□□□ 1.58
CDKN2A-201ENST00000304494 SERPINB8P50452 374 aa24.89■■□□□ 1.58
CDKN2A-201ENST00000304494 ACTN3Q08043 901 aaPredicted RBP24.89■■□□□ 1.58
CDKN2A-201ENST00000304494 EXT1Q16394 746 aa24.89■■□□□ 1.58
CDKN2A-201ENST00000304494 HIST2H2ACQ16777 129 aaPredicted RBP24.89■■□□□ 1.58
CDKN2A-201ENST00000304494 BTBD16Q32M84 506 aa24.89■■□□□ 1.58
CDKN2A-201ENST00000304494 HIST2H2AA3Q6FI13 130 aa24.89■■□□□ 1.58
CDKN2A-201ENST00000304494 CLEC18BQ6UXF7 455 aa24.89■■□□□ 1.58
CDKN2A-201ENST00000304494 CLEC18CQ8NCF0 446 aa24.89■■□□□ 1.58
CDKN2A-201ENST00000304494 RHEBL1Q8TAI7 183 aa24.89■■□□□ 1.58
CDKN2A-201ENST00000304494 KCTD4Q8WVF5 259 aa24.89■■□□□ 1.58
CDKN2A-201ENST00000304494 NXNL1Q96CM4 212 aa24.89■■□□□ 1.58
CDKN2A-201ENST00000304494 HMX2A2RU54 273 aa24.88■■□□□ 1.57
CDKN2A-201ENST00000304494 LRIT2A6NDA9 550 aa24.88■■□□□ 1.57
CDKN2A-201ENST00000304494 DNAJB6O75190 326 aa24.88■■□□□ 1.57
CDKN2A-201ENST00000304494 ACSL3O95573 720 aa24.88■■□□□ 1.57
CDKN2A-201ENST00000304494 IRF8Q02556 426 aa24.88■■□□□ 1.57
CDKN2A-201ENST00000304494 DOC2AQ14183 400 aa24.88■■□□□ 1.57
CDKN2A-201ENST00000304494 TBCCQ15814 346 aa24.88■■□□□ 1.57
CDKN2A-201ENST00000304494 SFT2D3Q587I9 215 aa24.88■■□□□ 1.57
CDKN2A-201ENST00000304494 KLC3Q6P597 504 aa24.88■■□□□ 1.57
CDKN2A-201ENST00000304494 CENPLQ8N0S6 344 aaPredicted RBP24.88■■□□□ 1.57
CDKN2A-201ENST00000304494 CEP112Q8N8E3 955 aa24.88■■□□□ 1.57
CDKN2A-201ENST00000304494 UBTD2Q8WUN7 234 aa24.88■■□□□ 1.57
CDKN2A-201ENST00000304494 HAS2Q92819 552 aa24.88■■□□□ 1.57
CDKN2A-201ENST00000304494 LPAR4Q99677 370 aa24.88■■□□□ 1.57
CDKN2A-201ENST00000304494 AGPAT4Q9NRZ5 378 aa24.88■■□□□ 1.57
CDKN2A-201ENST00000304494 IKBKGQ9Y6K9 419 aa24.88■■□□□ 1.57
CDKN2A-201ENST00000304494 NBASA2RRP1 2371 aa24.87■■□□□ 1.57
CDKN2A-201ENST00000304494 UBXN8O00124 270 aa24.87■■□□□ 1.57
CDKN2A-201ENST00000304494 B4GALT2O60909 372 aa24.87■■□□□ 1.57
CDKN2A-201ENST00000304494 INHBAP08476 426 aa24.87■■□□□ 1.57
CDKN2A-201ENST00000304494 TYK2P29597 1187 aa24.87■■□□□ 1.57
CDKN2A-201ENST00000304494 BTN3A2P78410 334 aa24.87■■□□□ 1.57
CDKN2A-201ENST00000304494 ACAP2Q15057 778 aa24.87■■□□□ 1.57
CDKN2A-201ENST00000304494 ABHD17BQ5VST6 288 aa24.87■■□□□ 1.57
CDKN2A-201ENST00000304494 PAPD4Q6PIY7 484 aaKnown RBP24.87■■□□□ 1.57
CDKN2A-201ENST00000304494 QSOX2Q6ZRP7 698 aa24.87■■□□□ 1.57
CDKN2A-201ENST00000304494 M1APQ8TC57 530 aa24.87■■□□□ 1.57
CDKN2A-201ENST00000304494 MS4A6EQ96DS6 147 aa24.87■■□□□ 1.57
CDKN2A-201ENST00000304494 NPLQ9BXD5 320 aaPredicted RBP24.87■■□□□ 1.57
CDKN2A-201ENST00000304494 RNF32Q9H0A6 362 aa24.87■■□□□ 1.57
CDKN2A-201ENST00000304494 OPTCQ9UBM4 332 aa24.87■■□□□ 1.57
CDKN2A-201ENST00000304494 FLNCQ14315 2725 aa24.86■■□□□ 1.57
CDKN2A-201ENST00000304494 A0A096LPK6 155 aa24.86■■□□□ 1.57
CDKN2A-201ENST00000304494 C4orf51C9J302 202 aa24.86■■□□□ 1.57
CDKN2A-201ENST00000304494 K7EPI3 171 aa24.86■■□□□ 1.57
CDKN2A-201ENST00000304494 ERI3O43414 337 aaKnown RBP24.86■■□□□ 1.57
CDKN2A-201ENST00000304494 PRMT3O60678 531 aa24.86■■□□□ 1.57
CDKN2A-201ENST00000304494 PRAMEF4O60810 478 aa24.86■■□□□ 1.57
CDKN2A-201ENST00000304494 ECHS1P30084 290 aa24.86■■□□□ 1.57
CDKN2A-201ENST00000304494 HNRNPH1P31943 449 aaKnown RBP24.86■■□□□ 1.57
CDKN2A-201ENST00000304494 OR4D2P58180 307 aa24.86■■□□□ 1.57
CDKN2A-201ENST00000304494 IRF9Q00978 393 aa24.86■■□□□ 1.57
CDKN2A-201ENST00000304494 CHIT1Q13231 466 aa24.86■■□□□ 1.57
CDKN2A-201ENST00000304494 PRAMEF9Q5VWM5 478 aa24.86■■□□□ 1.57
CDKN2A-201ENST00000304494 RPUSD3Q6P087 351 aaKnown RBP24.86■■□□□ 1.57
CDKN2A-201ENST00000304494 TRIM40Q6P9F5 258 aa24.86■■□□□ 1.57
CDKN2A-201ENST00000304494 TAOK1Q7L7X3 1001 aa24.86■■□□□ 1.57
CDKN2A-201ENST00000304494 CA13Q8N1Q1 262 aa24.86■■□□□ 1.57
CDKN2A-201ENST00000304494 CATSPER1Q8NEC5 780 aa24.86■■□□□ 1.57
CDKN2A-201ENST00000304494 SLC44A1Q8WWI5 657 aa24.86■■□□□ 1.57
CDKN2A-201ENST00000304494 TSLPQ969D9 159 aa24.86■■□□□ 1.57
CDKN2A-201ENST00000304494 UBE2E3Q969T4 207 aa24.86■■□□□ 1.57
CDKN2A-201ENST00000304494 PTCHD1Q96NR3 888 aa24.86■■□□□ 1.57
CDKN2A-201ENST00000304494 BARD1Q99728 777 aaKnown RBP24.86■■□□□ 1.57
CDKN2A-201ENST00000304494 REXO4Q9GZR2 422 aaKnown RBP24.86■■□□□ 1.57
CDKN2A-201ENST00000304494 AICDAQ9GZX7 198 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms