RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 ZNF423Q2M1K9 1284 aa20.33■□□□□ 0.85
LETM1-201ENST00000302787 THOC7Q6I9Y2 204 aaKnown RBP20.33■□□□□ 0.85
LETM1-201ENST00000302787 PSAPL1Q6NUJ1 521 aa20.33■□□□□ 0.85
LETM1-201ENST00000302787 ZNF675Q8TD23 568 aa20.33■□□□□ 0.85
LETM1-201ENST00000302787 RTP4Q96DX8 246 aa20.33■□□□□ 0.85
LETM1-201ENST00000302787 ZNF639Q9UID6 485 aa20.33■□□□□ 0.85
LETM1-201ENST00000302787 SLC16A5O15375 505 aa20.33■□□□□ 0.84
LETM1-201ENST00000302787 PCDHGA12O60330 932 aa20.33■□□□□ 0.84
LETM1-201ENST00000302787 PIGFQ07326 219 aa20.33■□□□□ 0.84
LETM1-201ENST00000302787 VMACQ2NL98 169 aa20.33■□□□□ 0.84
LETM1-201ENST00000302787 LY6G5CQ5SRR4 150 aa20.33■□□□□ 0.84
LETM1-201ENST00000302787 SHQ1Q6PI26 577 aaKnown RBP20.33■□□□□ 0.84
LETM1-201ENST00000302787 CICQ96RK0 1608 aaPredicted RBP20.33■□□□□ 0.84
LETM1-201ENST00000302787 ZNF670-ZNF695F2Z2N8 137 aa20.33■□□□□ 0.84
LETM1-201ENST00000302787 CAPN5O15484 640 aaPredicted RBP20.33■□□□□ 0.84
LETM1-201ENST00000302787 MPC1LP0DKB6 136 aa20.33■□□□□ 0.84
LETM1-201ENST00000302787 EDNRBP24530 442 aa20.33■□□□□ 0.84
LETM1-201ENST00000302787 MLLT3P42568 568 aaPredicted RBP20.33■□□□□ 0.84
LETM1-201ENST00000302787 NRG3P56975 720 aa20.33■□□□□ 0.84
LETM1-201ENST00000302787 NPWQ8N729 165 aa20.33■□□□□ 0.84
LETM1-201ENST00000302787 ANKFN1Q8N957 763 aa20.33■□□□□ 0.84
LETM1-201ENST00000302787 CCDC107Q8WV48 283 aa20.33■□□□□ 0.84
LETM1-201ENST00000302787 DPYSL5Q9BPU6 564 aa20.33■□□□□ 0.84
LETM1-201ENST00000302787 OR51I1Q9H343 314 aa20.33■□□□□ 0.84
LETM1-201ENST00000302787 FBXL12Q9NXK8 326 aa20.33■□□□□ 0.84
LETM1-201ENST00000302787 NRXN3Q9Y4C0 1643 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 A0A1W2PQ45 241 aaPredicted RBP20.32■□□□□ 0.84
LETM1-201ENST00000302787 A0A1W2PQY0 241 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 TNFP01375 233 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 CHRNA1P02708 482 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 IFI30P13284 250 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 PON3Q15166 354 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 OR4D1Q15615 310 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 TRIM74Q86UV6 250 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 GNPDA2Q8TDQ7 276 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 HMGB4Q8WW32 186 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 RIT1Q92963 219 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 EXOSC1Q9Y3B2 195 aaKnown RBP20.32■□□□□ 0.84
LETM1-201ENST00000302787 SETD1AO15047 1707 aaKnown RBP20.32■□□□□ 0.84
LETM1-201ENST00000302787 RASGEF1BQ0VAM2 473 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 TP53INP2Q8IXH6 220 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 ZNF548Q8NEK5 533 aaPredicted RBP20.32■□□□□ 0.84
LETM1-201ENST00000302787 RETREG1Q9H6L5 497 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 ZNF69Q9UC07 566 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 IGKV6-21A0A0C4DH24 114 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 NOVP48745 357 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 ST3GAL4Q11206 333 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 TRAM2Q15035 370 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 AMZ1Q400G9 498 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 KANK2Q63ZY3 851 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 BPIFB1Q8TDL5 484 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 CRYGNQ8WXF5 182 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 MMP27Q9H306 513 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 Q9N2J8 555 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 ST14Q9Y5Y6 855 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 DENRO43583 198 aaKnown RBP20.32■□□□□ 0.84
LETM1-201ENST00000302787 HLA-EP13747 358 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 AP2S1P53680 142 aaPredicted RBP20.32■□□□□ 0.84
LETM1-201ENST00000302787 FPGSQ05932 587 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 ZNF776Q68DI1 518 aaPredicted RBP20.32■□□□□ 0.84
LETM1-201ENST00000302787 OR5T3Q8NGG3 340 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 SETD6Q8TBK2 473 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 OSTF1Q92882 214 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 WACQ9BTA9 647 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 DOHHQ9BU89 302 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 ZNF696Q9H7X3 374 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 ERVK-18Q9QC07 812 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 SEC14L4Q9UDX3 406 aa20.32■□□□□ 0.84
LETM1-201ENST00000302787 CHD2O14647 1828 aaKnown RBP20.31■□□□□ 0.84
LETM1-201ENST00000302787 GRID2O43424 1007 aa20.31■□□□□ 0.84
LETM1-201ENST00000302787 ETV3P41162 512 aa20.31■□□□□ 0.84
LETM1-201ENST00000302787 OR3A3P47888 321 aa20.31■□□□□ 0.84
LETM1-201ENST00000302787 OR3A2P47893 321 aa20.31■□□□□ 0.84
LETM1-201ENST00000302787 C17orf62Q9BQA9 187 aa20.31■□□□□ 0.84
LETM1-201ENST00000302787 NLGN3Q9NZ94 848 aa20.31■□□□□ 0.84
LETM1-201ENST00000302787 SMIM30A4D0T7 59 aa20.31■□□□□ 0.84
LETM1-201ENST00000302787 H0YJX3 145 aa20.31■□□□□ 0.84
LETM1-201ENST00000302787 AOC2O75106 756 aa20.31■□□□□ 0.84
LETM1-201ENST00000302787 OR4D2P58180 307 aa20.31■□□□□ 0.84
LETM1-201ENST00000302787 ZNF367Q7RTV3 350 aa20.31■□□□□ 0.84
LETM1-201ENST00000302787 SCAMP4Q969E2 229 aa20.31■□□□□ 0.84
LETM1-201ENST00000302787 SCDO00767 359 aa20.31■□□□□ 0.84
LETM1-201ENST00000302787 GALTP07902 379 aa20.31■□□□□ 0.84
LETM1-201ENST00000302787 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.31■□□□□ 0.84
LETM1-201ENST00000302787 SLC37A3Q8NCC5 494 aa20.31■□□□□ 0.84
LETM1-201ENST00000302787 C15orf40Q8WUR7 153 aa20.31■□□□□ 0.84
LETM1-201ENST00000302787 IGKV6D-21A0A0A0MT36 114 aa20.31■□□□□ 0.84
LETM1-201ENST00000302787 C5orf51A6NDU8 294 aa20.31■□□□□ 0.84
LETM1-201ENST00000302787 GLOD5A6NK44 160 aa20.31■□□□□ 0.84
LETM1-201ENST00000302787 SOCS2O14508 198 aa20.31■□□□□ 0.84
LETM1-201ENST00000302787 LEFTY1O75610 366 aa20.31■□□□□ 0.84
LETM1-201ENST00000302787 CSN2P05814 226 aa20.31■□□□□ 0.84
LETM1-201ENST00000302787 ARSDP51689 593 aa20.31■□□□□ 0.84
LETM1-201ENST00000302787 PRAMEF17Q5VTA0 474 aa20.31■□□□□ 0.84
LETM1-201ENST00000302787 SNX29P2Q8IUI4 249 aa20.31■□□□□ 0.84
LETM1-201ENST00000302787 CHERPQ8IWX8 916 aaKnown RBP20.31■□□□□ 0.84
LETM1-201ENST00000302787 SMPDL3BQ92485 455 aa20.31■□□□□ 0.84
LETM1-201ENST00000302787 CCDC115Q96NT0 180 aa20.31■□□□□ 0.84
LETM1-201ENST00000302787 TM9SF2Q99805 663 aa20.31■□□□□ 0.84
LETM1-201ENST00000302787 CENPMQ9NSP4 180 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms