RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.39□□□□□ -0.43
HIF3A-204ENST00000300862 MAP4K5Q9Y4K4 846 aa12.39□□□□□ -0.43
HIF3A-204ENST00000300862 PCDHGB1Q9Y5G3 927 aa12.39□□□□□ -0.43
HIF3A-204ENST00000300862 NINQ8N4C6 2090 aa12.39□□□□□ -0.43
HIF3A-204ENST00000300862 C1orf105O95561 183 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 RHOP08100 348 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 ALOX5P09917 674 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 HLA-EP13747 358 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 NPPBP16860 134 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 ACVR2AP27037 513 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 C21orf33P30042 268 aaPredicted RBP12.38□□□□□ -0.43
HIF3A-204ENST00000300862 NNMTP40261 264 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 ASMTP46597 345 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 NUDT6P53370 316 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 PRSS53Q2L4Q9 553 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 PAGE2BQ5JRK9 111 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 MINDY2Q8NBR6 621 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 C11orf65Q8NCR3 313 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 PROX1Q92786 737 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 TIFAQ96CG3 184 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 MAGEB10Q96LZ2 347 aaPredicted RBP12.38□□□□□ -0.43
HIF3A-204ENST00000300862 FOPNLQ96NB1 174 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 DOHHQ9BU89 302 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 SORBS1Q9BX66 1292 aaKnown RBP12.38□□□□□ -0.43
HIF3A-204ENST00000300862 KLHL25Q9H0H3 589 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 OR2AG1Q9H205 316 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 BRF2Q9HAW0 419 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 SCHIP1Q9P0W5 487 aaPredicted RBP12.38□□□□□ -0.43
HIF3A-204ENST00000300862 BTNL2Q9UIR0 455 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 MAFFQ9ULX9 164 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 PRKAB1Q9Y478 270 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 PCDHGA6Q9Y5G7 932 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 PRAMEF25A6NGN4 478 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 J3KTA2 159 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 TNFRSF11BO00300 401 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 POU2F1P14859 743 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 HOXB6P17509 224 aaKnown RBP12.38□□□□□ -0.43
HIF3A-204ENST00000300862 MMP12P39900 470 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 MVDP53602 400 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 SELENBP1Q13228 472 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 INAQ16352 499 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 MPEG1Q2M385 716 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 TCEAL5Q5H9L2 206 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 PLEKHG7Q6ZR37 379 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 SLC5A8Q8N695 610 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 NFKBIDQ8NI38 313 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 POP5Q969H6 163 aaKnown RBP12.38□□□□□ -0.43
HIF3A-204ENST00000300862 COQ8BQ96D53 544 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 TOX2Q96NM4 488 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 IL17FQ96PD4 163 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 SLC35A5Q9BS91 424 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 SPATA7Q9P0W8 599 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 SPASTQ9UBP0 616 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 RNF6Q9Y252 685 aa12.38□□□□□ -0.43
HIF3A-204ENST00000300862 A8MU76 341 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 RCVRNP35243 200 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 IDH2P48735 452 aaKnown RBP12.37□□□□□ -0.43
HIF3A-204ENST00000300862 ST13P50502 369 aaKnown RBP12.37□□□□□ -0.43
HIF3A-204ENST00000300862 DGKEP52429 567 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 HNRNPFP52597 415 aaKnown RBP12.37□□□□□ -0.43
HIF3A-204ENST00000300862 CDH12P55289 794 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 SPIN4Q56A73 249 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 PRSS36Q5K4E3 855 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 SYT6Q5T7P8 510 aaPredicted RBP12.37□□□□□ -0.43
HIF3A-204ENST00000300862 DPPA4Q7L190 304 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 S100ZQ8WXG8 99 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 ACAT2Q9BWD1 397 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 KIAA1671Q9BY89 1806 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 POU2F3Q9UKI9 436 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 PLAGL1Q9UM63 463 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 LYVE1Q9Y5Y7 322 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 KLK1P06870 262 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 CD36P16671 472 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 PCGF2P35227 344 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 TAS2R50P59544 299 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 CXCR4P61073 352 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 C2orf80Q0P641 193 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 PROX2Q3B8N5 592 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 ANXA8L1Q5VT79 327 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 TRMT11Q7Z4G4 463 aaKnown RBP12.37□□□□□ -0.43
HIF3A-204ENST00000300862 ADCK1Q86TW2 530 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 C12orf40Q86WS4 652 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 LRRC3BQ96PB8 259 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 ZNF300Q96RE9 604 aaPredicted RBP12.37□□□□□ -0.43
HIF3A-204ENST00000300862 NIPSNAP1Q9BPW8 284 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 SIAEQ9HAT2 523 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 FBXO8Q9NRD0 319 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 ANKMY1Q9P2S6 941 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 SLC6A14Q9UN76 642 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 PCDHGB3Q9Y5G1 929 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 HSPE1-MOB4S4R3N1 261 aa12.37□□□□□ -0.43
HIF3A-204ENST00000300862 DNAJB5O75953 348 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 CLTBP09497 229 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 LINC00271P0C7V0 271 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 HSD3B1P14060 373 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 HSD3B2P26439 372 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 TPTEP56180 551 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 C21orf58P58505 322 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 SELENOWP63302 87 aa12.36□□□□□ -0.43
HIF3A-204ENST00000300862 SPIBQ01892 262 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms