RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 KRT78Q8N1N4 520 aa13.04□□□□□ -0.32
TMEM41B-201ENST00000299596 HORMAD2Q8N7B1 307 aa13.04□□□□□ -0.32
TMEM41B-201ENST00000299596 FAR2Q96K12 515 aa13.04□□□□□ -0.32
TMEM41B-201ENST00000299596 PITHD1Q9GZP4 211 aaPredicted RBP13.04□□□□□ -0.32
TMEM41B-201ENST00000299596 KLHL31Q9H511 634 aa13.04□□□□□ -0.32
TMEM41B-201ENST00000299596 CNOT10Q9H9A5 744 aaKnown RBP13.04□□□□□ -0.32
TMEM41B-201ENST00000299596 GPRC5BQ9NZH0 403 aa13.04□□□□□ -0.32
TMEM41B-201ENST00000299596 UTP11Q9Y3A2 253 aaKnown RBP13.04□□□□□ -0.32
TMEM41B-201ENST00000299596 TCRBV9S1A1TA0A576 114 aa13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 CTAGE15A4D2H0 777 aa13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 CXorf49A8MYA2 514 aaPredicted RBP13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 RAD51CO43502 376 aa13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 PIAS1O75925 651 aa13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 WISP3O95389 354 aaPredicted RBP13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 CCDC166P0CW27 439 aa13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 STMN1P16949 149 aa13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 HPDP32754 393 aaPredicted RBP13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 GGT5P36269 586 aa13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 GP5P40197 560 aa13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 CD96P40200 585 aa13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 ATP6V0D1P61421 351 aa13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 CAV1Q03135 178 aa13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 TUBA3CQ13748 450 aa13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 TOR1AIP1Q5JTV8 583 aa13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 TUBA3EQ6PEY2 450 aa13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 CTAGE6Q86UF2 777 aa13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 GPSM1Q86YR5 675 aa13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 CYP4X1Q8N118 509 aa13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 ARMC2Q8NEN0 867 aa13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 ELP5Q8TE02 316 aa13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 RELTQ969Z4 430 aa13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 GPR22Q99680 433 aa13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 RBBP8Q99708 897 aa13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 PHACTR1Q9C0D0 580 aa13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 EHD1Q9H4M9 534 aa13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 NT5DC2Q9H857 520 aa13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 CAB39LQ9H9S4 337 aa13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 PRDM9Q9NQV7 894 aa13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 GRHL1Q9NZI5 618 aa13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 COPG2Q9UBF2 871 aa13.03□□□□□ -0.32
TMEM41B-201ENST00000299596 SCN3AQ9NY46 2000 aa13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 A0A088AWK7 358 aa13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 NCF1BA6NI72 391 aaPredicted RBP13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 FAM159BA6NKW6 160 aa13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 NCF1CA8MVU1 366 aaPredicted RBP13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 NCF1P14598 390 aaPredicted RBP13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 CD46P15529 392 aa13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 ZNF10P21506 573 aaPredicted RBP13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 CASQ1P31415 396 aa13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 SPRP35270 261 aaPredicted RBP13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 KCNK10P57789 538 aa13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 BTN3A2P78410 334 aa13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 BTG2P78543 158 aa13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 SLBPQ14493 270 aaKnown RBP eCLIP13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 OR1C1Q15619 314 aa13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 ZRSR2Q15696 482 aaKnown RBP13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 C18orf21Q32NC0 220 aaPredicted RBP13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 SULT1C3Q6IMI6 304 aa13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 FJX1Q86VR8 437 aa13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 RPS19BP1Q86WX3 136 aaKnown RBP13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.02□□□□□ -0.332e-6■■■■■ 40.9
TMEM41B-201ENST00000299596 SPATA6LQ8N4H0 392 aa13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 MDS2Q8NDY4 140 aa13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 GAL3ST3Q96A11 431 aa13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 NPAS2Q99743 824 aa13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 NPLQ9BXD5 320 aaPredicted RBP13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 RAB17Q9H0T7 212 aa13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 RHBGQ9H310 441 aa13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 DNAJC11Q9NVH1 559 aa13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 WWOXQ9NZC7 414 aa13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 SEC14L3Q9UDX4 400 aa13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 TEX15Q9BXT5 2789 aa13.02□□□□□ -0.33
TMEM41B-201ENST00000299596 IGKV3D-11A0A0A0MRZ8 115 aa13.01□□□□□ -0.33
TMEM41B-201ENST00000299596 TCRBV16S1A1N1A0A5B0 115 aa13.01□□□□□ -0.33
TMEM41B-201ENST00000299596 LRIT2A6NDA9 550 aa13.01□□□□□ -0.33
TMEM41B-201ENST00000299596 ANKDD1BA6NHY2 528 aa13.01□□□□□ -0.33
TMEM41B-201ENST00000299596 GABRR3A8MPY1 467 aa13.01□□□□□ -0.33
TMEM41B-201ENST00000299596 CLGNO14967 610 aa13.01□□□□□ -0.33
TMEM41B-201ENST00000299596 TAPBPO15533 448 aa13.01□□□□□ -0.33
TMEM41B-201ENST00000299596 PHGDHO43175 533 aaKnown RBP13.01□□□□□ -0.33
TMEM41B-201ENST00000299596 CLEC3AO75596 197 aa13.01□□□□□ -0.33
TMEM41B-201ENST00000299596 STK16O75716 305 aa13.01□□□□□ -0.33
TMEM41B-201ENST00000299596 UNC5CO95185 931 aa13.01□□□□□ -0.33
TMEM41B-201ENST00000299596 MLYCDO95822 493 aa13.01□□□□□ -0.33
TMEM41B-201ENST00000299596 CD1DP15813 335 aa13.01□□□□□ -0.33
TMEM41B-201ENST00000299596 MAOAP21397 527 aa13.01□□□□□ -0.33
TMEM41B-201ENST00000299596 MST1P26927 711 aa13.01□□□□□ -0.33
TMEM41B-201ENST00000299596 COL8A1P27658 744 aa13.01□□□□□ -0.33
TMEM41B-201ENST00000299596 EEF1DP29692 281 aaKnown RBP13.01□□□□□ -0.33
TMEM41B-201ENST00000299596 PLTPP55058 493 aa13.01□□□□□ -0.33
TMEM41B-201ENST00000299596 RAB10P61026 200 aa13.01□□□□□ -0.33
TMEM41B-201ENST00000299596 OC90Q02509 493 aaPredicted RBP13.01□□□□□ -0.33
TMEM41B-201ENST00000299596 RBPJQ06330 500 aa13.01□□□□□ -0.33
TMEM41B-201ENST00000299596 C2orf54Q08AI8 447 aa13.01□□□□□ -0.33
TMEM41B-201ENST00000299596 ZKSCAN8Q15776 578 aaPredicted RBP13.01□□□□□ -0.33
TMEM41B-201ENST00000299596 GRTP1Q5TC63 336 aa13.01□□□□□ -0.33
TMEM41B-201ENST00000299596 C1QL3Q5VWW1 255 aa13.01□□□□□ -0.33
TMEM41B-201ENST00000299596 SPINK14Q6IE38 97 aa13.01□□□□□ -0.33
TMEM41B-201ENST00000299596 CTAGE3PQ8IX95 158 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms