RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 OR1A2Q9Y585 309 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 PCDHGA10Q9Y5H3 936 aa6.4□□□□□ -1.38
TMC1-201ENST00000297784 A0A1B0GTL3 188 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 LOC100130705A0A1B0GUX0 176 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 NPEPPSL1A6NEC2 478 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 PDZK1P1A8MUH7 402 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 CHURC1-FNTBB4DL54 471 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 ERVH48-1M5A8F1 160 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 PPP6CO00743 305 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 MAN2B1O00754 1011 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 UBFD1O14562 309 aaKnown RBP6.4□□□□□ -1.39
TMC1-201ENST00000297784 CAPN5O15484 640 aaPredicted RBP6.4□□□□□ -1.39
TMC1-201ENST00000297784 KLK8O60259 260 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 LZTS3O60299 673 aaPredicted RBP6.4□□□□□ -1.39
TMC1-201ENST00000297784 RBP1P09455 135 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 ZNF8P17098 575 aaPredicted RBP6.4□□□□□ -1.39
TMC1-201ENST00000297784 POLR2CP19387 275 aaPredicted RBP6.4□□□□□ -1.39
TMC1-201ENST00000297784 AP2S1P53680 142 aaPredicted RBP6.4□□□□□ -1.39
TMC1-201ENST00000297784 OR2B6P58173 313 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 IL2P60568 153 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 NCS1P62166 190 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 SLC35A2P78381 396 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 MRPS15P82914 257 aaKnown RBP6.4□□□□□ -1.39
TMC1-201ENST00000297784 TARDBPQ13148 414 aaKnown RBP eCLIP6.4□□□□□ -1.39
TMC1-201ENST00000297784 CDK5R2Q13319 367 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 CLCA4Q14CN2 919 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 RAET1GQ6H3X3 334 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 USP30Q70CQ3 517 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 STK32CQ86UX6 486 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 FAM124AQ86V42 546 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 PHF21BQ96EK2 531 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 C3orf30Q96M34 536 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 RNF145Q96MT1 663 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 TEX101Q9BY14 249 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 FBRSQ9HAH7 460 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 LTB4R2Q9NPC1 389 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 ITM2CQ9NQX7 267 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 RAD18Q9NS91 495 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 ACOXLQ9NUZ1 547 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 CCDC59Q9P031 241 aaKnown RBP6.4□□□□□ -1.39
TMC1-201ENST00000297784 USP36Q9P275 1121 aaKnown RBP6.4□□□□□ -1.39
TMC1-201ENST00000297784 DNAJB9Q9UBS3 223 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 TRMT6Q9UJA5 497 aaKnown RBP6.4□□□□□ -1.39
TMC1-201ENST00000297784 MKLN1Q9UL63 735 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 PNMA8BQ9ULN7 279 aaPredicted RBP6.4□□□□□ -1.39
TMC1-201ENST00000297784 FZD4Q9ULV1 537 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 TPRKBQ9Y3C4 175 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 FIS1Q9Y3D6 152 aa6.4□□□□□ -1.39
TMC1-201ENST00000297784 A0A1W2PQU0 124 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 KRT87PA6NCN2 255 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 G3V2T6 193 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 KERAO60938 352 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 VPS4BO75351 444 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 SIX3O95343 332 aaPredicted RBP6.39□□□□□ -1.39
TMC1-201ENST00000297784 MAT2AP31153 395 aaKnown RBP6.39□□□□□ -1.39
TMC1-201ENST00000297784 GGT5P36269 586 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 TGFBR2P37173 567 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 PIGAP37287 484 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 GPR1P46091 355 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 PRLHRP49683 370 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 RPS21P63220 83 aaKnown RBP6.39□□□□□ -1.39
TMC1-201ENST00000297784 YBX1P67809 324 aaKnown RBP6.39□□□□□ -1.39
TMC1-201ENST00000297784 CDK3Q00526 305 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 NFKB2Q00653 900 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 KCNAB2Q13303 367 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 IRF4Q15306 451 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 C18orf21Q32NC0 220 aaPredicted RBP6.39□□□□□ -1.39
TMC1-201ENST00000297784 FAM98BQ52LJ0 330 aaKnown RBP6.39□□□□□ -1.39
TMC1-201ENST00000297784 COLEC12Q5KU26 742 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 EOGTQ5NDL2 527 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 SNAP47Q5SQN1 464 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 SULT1C3Q6IMI6 304 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 NEK5Q6P3R8 708 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 ADAMTSL4Q6UY14 1074 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 HORMAD1Q86X24 394 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 RASGRP3Q8IV61 690 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 LIX1LQ8IVB5 337 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 FAM109AQ8N4B1 249 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 NKAPQ8N5F7 415 aaKnown RBP6.39□□□□□ -1.39
TMC1-201ENST00000297784 ZBTB2Q8N680 514 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 NATD1Q8N6N6 113 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 PSD4Q8NDX1 1056 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 FAM83FQ8NEG4 500 aaPredicted RBP6.39□□□□□ -1.39
TMC1-201ENST00000297784 SETD6Q8TBK2 473 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 MCOLN3Q8TDD5 553 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 FOXJ1Q92949 421 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 ZHX1-C8orf76Q96EF9 292 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 UGT2B28Q9BY64 529 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 SLC17A9Q9BYT1 436 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 OR2AG1Q9H205 316 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 CCNB1IP1Q9NPC3 277 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 FZD3Q9NPG1 666 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 ATP13A2Q9NQ11 1180 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 TM7SF3Q9NS93 570 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 ADPRHL2Q9NX46 363 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 TSR3Q9UJK0 312 aaKnown RBP6.39□□□□□ -1.39
TMC1-201ENST00000297784 C3orf18Q9UK00 162 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 SCML1Q9UN30 329 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 TEX51A0A1B0GUA7 166 aa6.39□□□□□ -1.39
TMC1-201ENST00000297784 PRR23AA6NEV1 266 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms