RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 SMG9Q9H0W8 520 aaKnown RBP9.61□□□□□ -0.87
TNFRSF11B-201ENST00000297350 SH3BP4Q9P0V3 963 aa9.61□□□□□ -0.87
TNFRSF11B-201ENST00000297350 GULP1Q9UBP9 304 aa9.61□□□□□ -0.87
TNFRSF11B-201ENST00000297350 BTBD3Q9Y2F9 522 aa9.61□□□□□ -0.87
TNFRSF11B-201ENST00000297350 PCDHGA6Q9Y5G7 932 aa9.61□□□□□ -0.87
TNFRSF11B-201ENST00000297350 KIAA1549LQ6ZVL6 1849 aa9.61□□□□□ -0.87
TNFRSF11B-201ENST00000297350 NUP210Q8TEM1 1887 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 FUOMA2VDF0 154 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 SAGE2PA6NJ88 616 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 LILRB5O75023 590 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 MOSPD3O75425 235 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 ETHE1O95571 254 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 ADH1CP00326 375 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 RPN2P04844 631 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 CTSLP07711 333 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 ARAFP10398 606 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 ZNF8P17098 575 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 CD40LGP29965 261 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 CRATP43155 626 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 CRYBA2P53672 197 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 PIGFQ07326 219 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 SFSWAPQ12872 951 aaKnown RBP9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 SLBPQ14493 270 aaKnown RBP eCLIP9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 ARHGAP19Q14CB8 494 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 OXA1LQ15070 435 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 ADPRMQ3LIE5 342 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 TMEM215Q68D42 235 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 LCTLQ6UWM7 567 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 NAGSQ8N159 534 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 RHOXF1Q8NHV9 184 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 SPPL2AQ8TCT8 520 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 C16orf78Q8WTQ4 265 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 QRFPRQ96P65 431 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 PIP5K1AQ99755 562 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 COPS4Q9BT78 406 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 PCBD2Q9H0N5 130 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 MMP27Q9H306 513 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 PELI2Q9HAT8 420 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 IL23AQ9NPF7 189 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 DPP7Q9UHL4 492 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 OSGIN1Q9UJX0 560 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 ERVK-11Q9UQG0 969 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 PCM1Q15154 2024 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 DENND4AQ7Z401 1863 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 ISPDA4D126 451 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 CLCA1A8K7I4 914 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 TMEM229AB2RXF0 380 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 TAF4O00268 1085 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 PCDHGA12O60330 932 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 NADKO95544 446 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 FADS2O95864 444 aaKnown RBP9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 RHOP08100 348 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 LINC00271P0C7V0 271 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 CSF2RAP15509 400 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 CDH3P22223 829 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 UQCRC2P22695 453 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 CXCR2P25025 360 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 ITGB8P26012 769 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 ALDH9A1P49189 494 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 DGKGP49619 791 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 MAPK10P53779 464 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 PCBP3P57721 371 aaKnown RBP9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 CDK6Q00534 326 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 EEF1A2Q05639 463 aaKnown RBP9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 CYP2A13Q16696 494 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 USP43Q70EL4 1123 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 PARS2Q7L3T8 475 aaKnown RBP9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 PLD3Q8IV08 490 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 LACC1Q8IV20 430 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 DNAJC22Q8N4W6 341 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 KBTBD8Q8NFY9 601 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 OR10Q1Q8NGQ4 319 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 APH1BQ8WW43 257 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 NUS1Q96E22 293 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 PAWRQ96IZ0 340 aaKnown RBP9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 COL21A1Q96P44 957 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 TRIM39Q9HCM9 518 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 C1GALT1Q9NS00 363 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 EXD2Q9NVH0 621 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 CNOT2Q9NZN8 540 aaKnown RBP9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 CCDC59Q9P031 241 aaKnown RBP9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 SPASTQ9UBP0 616 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 RNF6Q9Y252 685 aa9.6□□□□□ -0.87
TNFRSF11B-201ENST00000297350 CENPFP49454 3210 aa9.59□□□□□ -0.87
TNFRSF11B-201ENST00000297350 PCNTO95613 3336 aa9.59□□□□□ -0.87
TNFRSF11B-201ENST00000297350 EDDM13A0A1B0GTR0 161 aa9.59□□□□□ -0.87
TNFRSF11B-201ENST00000297350 EFCAB10A6NFE3 127 aa9.59□□□□□ -0.87
TNFRSF11B-201ENST00000297350 MAGEB3O15480 346 aa9.59□□□□□ -0.87
TNFRSF11B-201ENST00000297350 FOXD2O60548 495 aaPredicted RBP9.59□□□□□ -0.87
TNFRSF11B-201ENST00000297350 RFPL2O75678 378 aa9.59□□□□□ -0.87
TNFRSF11B-201ENST00000297350 PDE9AO76083 593 aa9.59□□□□□ -0.87
TNFRSF11B-201ENST00000297350 CDK1P06493 297 aa9.59□□□□□ -0.87
TNFRSF11B-201ENST00000297350 CD36P16671 472 aa9.59□□□□□ -0.87
TNFRSF11B-201ENST00000297350 RHCEP18577 417 aa9.59□□□□□ -0.87
TNFRSF11B-201ENST00000297350 KELP23276 732 aa9.59□□□□□ -0.87
TNFRSF11B-201ENST00000297350 IRS1P35568 1242 aa9.59□□□□□ -0.87
TNFRSF11B-201ENST00000297350 CHI3L1P36222 383 aaPredicted RBP9.59□□□□□ -0.87
TNFRSF11B-201ENST00000297350 MAP2K4P45985 399 aa9.59□□□□□ -0.87
TNFRSF11B-201ENST00000297350 XCR1P46094 333 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms