RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 ZDHHC3Q9NYG2 299 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 PCDHGA6Q9Y5G7 932 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 KCNE2Q9Y6J6 123 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 URB1O60287 2271 aaKnown RBP12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 YY2O15391 372 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 SLC16A6O15403 523 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 TLX2O43763 284 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 ETHE1O95571 254 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 HOXA9P31269 272 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 TARDBPQ13148 414 aaKnown RBP eCLIP12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 SLBPQ14493 270 aaKnown RBP eCLIP12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 NDUFA5Q16718 116 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 PROX2Q3B8N5 592 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 ZNF697Q5TEC3 545 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 ZNF57Q68EA5 555 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 PAQR6Q6TCH4 344 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 KLHDC8BQ8IXV7 354 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 DEPDC4Q8N2C3 294 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 HUS1BQ8NHY5 278 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 CD99L2Q8TCZ2 262 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 CMTM7Q96FZ5 175 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 VMP1Q96GC9 406 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 TMEM246Q9BRR3 403 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 DUSP21Q9H596 190 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 GPBP1L1Q9HC44 474 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 DYRK4Q9NR20 520 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 QPCTLQ9NXS2 382 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 NUFIP1Q9UHK0 495 aaKnown RBP12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 ITM2BQ9Y287 266 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 CEP290O15078 2479 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 KLK8O60259 260 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 NUAK1O60285 661 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 PDHA2P29803 388 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 CDK6Q00534 326 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 KIAA0040Q15053 153 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 GCNT6Q5T4J0 391 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 KDM4DQ6B0I6 523 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 TMEM220Q6QAJ8 160 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 GPR151Q8TDV0 419 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 ASZ1Q8WWH4 475 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 MMP27Q9H306 513 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 FAM83DQ9H4H8 585 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 SUV39H2Q9H5I1 410 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 MRPS7Q9Y2R9 242 aaKnown RBP12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 IFT52Q9Y366 437 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 LYVE1Q9Y5Y7 322 aa12.8□□□□□ -0.36
TNFRSF21-201ENST00000296861 ADAMDEC1O15204 470 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 CA12O43570 354 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 DYRK3O43781 588 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 ADORA3P0DMS8 318 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 AOAHP28039 575 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 EPHB3P54753 998 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 AP1S1P61966 158 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 HBA1P69905 142 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 SYT6Q5T7P8 510 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 USP30Q70CQ3 517 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 OR2AP1Q8NGE2 309 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 NRTNQ99748 197 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 OSGEPL1Q9H4B0 414 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 TBC1D17Q9HA65 648 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 RPRD1BQ9NQG5 326 aaKnown RBP12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 PLSCR3Q9NRY6 295 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 CARD8Q9Y2G2 431 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 ARID1AO14497 2285 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 SAGE2PA6NJ88 616 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 CLCA1A8K7I4 914 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 NOTOA8MTQ0 251 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 CCNB2O95067 398 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 MAGEA11P43364 429 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 MANFP55145 182 aaKnown RBP12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 IQCCQ4KMZ1 466 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 SNAP47Q5SQN1 464 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 NXNL2Q5VZ03 156 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 GDPD3Q7L5L3 318 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 FAM9CQ8IZT9 166 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 PJA1Q8NG27 643 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 BCL7CQ8WUZ0 217 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 CCDC115Q96NT0 180 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 CTRCQ99895 268 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 SLC30A2Q9BRI3 323 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 EMILIN2Q9BXX0 1053 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 RUVBL1Q9Y265 456 aaKnown RBP12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 GPR52Q9Y2T5 361 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 DYRK1BQ9Y463 629 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 SPIN1Q9Y657 262 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 PLXNB2O15031 1838 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 TRAV19A0A0A6YYK7 116 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 OR2A25A4D2G3 310 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 PLK4O00444 970 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 EOMESO95936 686 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 CD160O95971 181 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 ATP1B2P14415 290 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 BUD31P41223 144 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 SP3Q02447 781 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 MGAT3Q09327 533 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 RGNQ15493 299 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 C5orf22Q49AR2 442 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 C22orf42Q6IC83 251 aa12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 ZNF517Q6ZMY9 492 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF21-201ENST00000296861 GALNT12Q8IXK2 581 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms