RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 FIGLAQ6QHK4 219 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 RNF38Q9H0F5 515 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 C14orf105Q9NVL8 296 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 GPRC5BQ9NZH0 403 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 NPIPA1Q9UND3 350 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 ENTPD2Q9Y5L3 495 aa17.07■□□□□ 0.32
CDC42EP3-201ENST00000295324 SMAD6O43541 496 aaKnown RBP17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 MTRF1O75570 445 aaKnown RBP17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 FDXRP22570 491 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 SLC6A4P31645 630 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 CASP6P55212 293 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 SLAMF1Q13291 335 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 C6orf136Q5SQH8 315 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 RBM12BQ8IXT5 1001 aaKnown RBP17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 CCDC116Q8IYX3 515 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 OR5L2Q8NGL0 311 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 NAT14Q8WUY8 206 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 COX4I2Q96KJ9 171 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 ZNF717Q9BY31 904 aaPredicted RBP17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 EPHA6Q9UF33 1036 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 ZNF3P17036 446 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 DNAJA1P31689 397 aaKnown RBP17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 ARSFP54793 590 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 CD47Q08722 323 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 TTLL10Q6ZVT0 673 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 FAR1Q8WVX9 515 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 ASB9Q96DX5 294 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 PKP4Q99569 1192 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 IL17CQ9P0M4 197 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 B4GALT7Q9UBV7 327 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 NHSQ6T4R5 1651 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 RFPL1O75677 317 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 CDC123O75794 336 aaPredicted RBP17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 MTHFD1P11586 935 aaKnown RBP17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 UQCRC2P22695 453 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 TDGQ13569 410 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 CAMK1Q14012 370 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 DOC2AQ14183 400 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 MANEALQ5VSG8 457 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 OR52E8Q6IFG1 317 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 RPS27LQ71UM5 84 aaKnown RBP17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 CAPSLQ8WWF8 208 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 TP53INP1Q96A56 240 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 PREBQ9HCU5 417 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 GIN1Q9NXP7 522 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 MARK1Q9P0L2 795 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 FAUP35544 74 aaKnown RBP17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 PUM1Q14671 1186 aaKnown RBP eCLIP17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 REEP3Q6NUK4 255 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 TDHQ8IZJ6 230 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 OR6N1Q8NGY5 312 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 RTP4Q96DX8 246 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 LRRC46Q96FV0 321 aa17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 GPC6Q9Y625 555 aaPredicted RBP17.06■□□□□ 0.32
CDC42EP3-201ENST00000295324 SOBPA7XYQ1 873 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 BMP8BP34820 402 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 GFOD2Q3B7J2 385 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 AKIRIN2Q53H80 203 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 GPR153Q6NV75 609 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 RNF111Q6ZNA4 994 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 BMP8AQ7Z5Y6 402 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 OR4K1Q8NGD4 311 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 RPL36Q9Y3U8 105 aaKnown RBP17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 IQCMA0A1B0GVH7 501 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 NPIPB15A6NHN6 443 aaPredicted RBP17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 PRKD3O94806 890 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 IFNA6P05013 189 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 CD72P21854 359 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 STEAP4Q687X5 459 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 UBE2J2Q8N2K1 259 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 CRELD1Q96HD1 420 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 TMEM138Q9NPI0 162 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 SDK1Q7Z5N4 2213 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 DAPL1A0PJW8 107 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 ARPC2O15144 300 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 FAM189BP81408 668 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 ZNF550Q7Z398 422 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 ACVR1CQ8NER5 493 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 PCDHAC1Q9H158 963 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 PIGUQ9H490 435 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 ZFR2Q9UPR6 939 aaKnown RBP17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 DNMT3AQ9Y6K1 912 aaPredicted RBP17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 AHCYL1O43865 530 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 GSK3BP49841 420 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 ATP4BP51164 291 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 TSPEARQ8WU66 669 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 CD6P30203 668 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 CSNK1DP48730 415 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 ANKRD54Q6NXT1 300 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 PARP8Q8N3A8 854 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 ZSWIM3Q96MP5 696 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 IL26Q9NPH9 171 aa17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 RSL24D1Q9UHA3 163 aaKnown RBP17.05■□□□□ 0.32
CDC42EP3-201ENST00000295324 RPS3P23396 243 aaKnown RBP eCLIP17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 GALNT12Q8IXK2 581 aa17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 COMMD9Q9P000 198 aa17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 IFT52Q9Y366 437 aa17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 NUMBLQ9Y6R0 609 aa17.04■□□□□ 0.32
CDC42EP3-201ENST00000295324 GPR89AB7ZAQ6 455 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms