RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 NDUFA9Q16795 377 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 RAB41Q5JT25 222 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 NCBP2-AS2Q69YL0 99 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 IFT27Q9BW83 186 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 TM9SF3Q9HD45 589 aa11.45□□□□□ -0.58
SYNGAP1-201ENST00000293748 TMEM233B4DJY2 109 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 NEDD8-MDP1E9PL57 170 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 PCDH7O60245 1069 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 CREG1O75629 220 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 SLC34A2O95436 690 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 OAS1P00973 400 aaKnown RBP11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 SLC10A7Q0GE19 358 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 ANKDD1AQ495B1 522 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 C4orf46Q504U0 113 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 GLIS1Q8NBF1 620 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 FUZQ9BT04 418 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 MKS1Q9NXB0 559 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 TNFRSF10BO14763 440 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 H1F0P07305 194 aaKnown RBP11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 ENGP17813 658 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 SMSP52788 366 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 NFKB2Q00653 900 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 ZNF181Q2M3W8 571 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 SH3PXD2AQ5TCZ1 1133 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 PRAMEF17Q5VTA0 474 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 SLC30A6Q6NXT4 461 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 MSANTD2Q6P1R3 559 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 GOLM1Q8NBJ4 401 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 SIGLEC10Q96LC7 697 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 EFCAB11Q9BUY7 163 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 USP29Q9HBJ7 922 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 VPS29Q9UBQ0 182 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 PLCL2Q9UPR0 1127 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 H7C2Y5 167 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 DENRO43583 198 aaKnown RBP11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 PORP16435 677 aaPredicted RBP11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 NT5EP21589 574 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 ECHS1P30084 290 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 DGKQP52824 942 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 NUDT6P53370 316 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 ZXDAP98168 799 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 RAB39AQ14964 217 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 TXNRD3NBQ6F5E7 133 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 KLHL35Q6PF15 583 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 GPRIN1Q7Z2K8 1008 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 SDR16C5Q8N3Y7 309 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 OR9I1Q8NGQ6 314 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 NCSTNQ92542 709 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 CCDC106Q9BWC9 280 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 LGR4Q9BXB1 951 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 MAB21L2Q9Y586 359 aa11.44□□□□□ -0.58
SYNGAP1-201ENST00000293748 CDRT1O95170 752 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 AHSGP02765 367 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 DRD1P21728 446 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 IDSP22304 550 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 DNAJB13P59910 316 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 HMGCS1Q01581 520 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 ZNF155Q12901 538 aaPredicted RBP11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 TMEM53Q6P2H8 277 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 SLC2A7Q6PXP3 512 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 CAND1Q86VP6 1230 aaKnown RBP11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 SLC7A6OSQ96CW6 309 aaPredicted RBP11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 ZNF599Q96NL3 588 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 OR2B2Q9GZK3 357 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 IL37Q9NZH6 218 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 FZD4Q9ULV1 537 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 SNX10Q9Y5X0 201 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 ST14Q9Y5Y6 855 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 DUXAA6NLW8 204 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 AURKAO14965 403 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 EFNA1P20827 205 aaPredicted RBP11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 IGFALSP35858 605 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 DGKGP49619 791 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 MPP2Q14168 576 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 ATP6AP1Q15904 470 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 MYLK3Q32MK0 819 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 TNFAIP8L2Q6P589 184 aaPredicted RBP11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 SMARCD3Q6STE5 483 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 MIPEPQ99797 713 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 UCK2Q9BZX2 261 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 TNFRSF10DQ9UBN6 386 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 HCN4Q9Y3Q4 1203 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 A0A1W2PRQ8 180 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 LAMTOR5O43504 91 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 KRT33AO76009 404 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 POP4O95707 220 aaKnown RBP11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 ALPPP05187 535 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 FGF3P11487 239 aaPredicted RBP11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 CCR2P41597 374 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 GRK6P43250 576 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 HLCSP50747 726 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 ATXN1P54253 815 aaKnown RBP11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 DSTNP60981 165 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 SLC25A11Q02978 314 aaKnown RBP11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 TOMM20Q15388 145 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 PARGQ86W56 976 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 OSBPL2Q9H1P3 480 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 CD93Q9NPY3 652 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 SPHK2Q9NRA0 654 aa11.43□□□□□ -0.58
SYNGAP1-201ENST00000293748 ZCCHC3Q9NUD5 404 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms