RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 ZNF844Q08AG5 666 aa12.64□□□□□ -0.39
VPS28-201ENST00000292510 TRAF3Q13114 568 aa12.64□□□□□ -0.39
VPS28-201ENST00000292510 CPSF6Q16630 551 aaKnown RBP eCLIP12.64□□□□□ -0.39
VPS28-201ENST00000292510 KRT71Q3SY84 523 aa12.64□□□□□ -0.39
VPS28-201ENST00000292510 UNC50Q53HI1 259 aa12.64□□□□□ -0.39
VPS28-201ENST00000292510 ZNF678Q5SXM1 525 aa12.64□□□□□ -0.39
VPS28-201ENST00000292510 LIPJQ5W064 366 aa12.64□□□□□ -0.39
VPS28-201ENST00000292510 FAAH2Q6GMR7 532 aa12.64□□□□□ -0.39
VPS28-201ENST00000292510 METTL2BQ6P1Q9 378 aaKnown RBP12.64□□□□□ -0.39
VPS28-201ENST00000292510 SRRM1Q8IYB3 904 aaKnown RBP12.64□□□□□ -0.39
VPS28-201ENST00000292510 LAS2Q8IYD9 372 aa12.64□□□□□ -0.39
VPS28-201ENST00000292510 CNPY4Q8N129 248 aa12.64□□□□□ -0.39
VPS28-201ENST00000292510 GAL3ST3Q96A11 431 aa12.64□□□□□ -0.39
VPS28-201ENST00000292510 C8orf44Q96CB5 159 aa12.64□□□□□ -0.39
VPS28-201ENST00000292510 PEX11GQ96HA9 241 aa12.64□□□□□ -0.39
VPS28-201ENST00000292510 F2RL3Q96RI0 385 aa12.64□□□□□ -0.39
VPS28-201ENST00000292510 TMEM109Q9BVC6 243 aa12.64□□□□□ -0.39
VPS28-201ENST00000292510 REXO4Q9GZR2 422 aaKnown RBP12.64□□□□□ -0.39
VPS28-201ENST00000292510 P4HTMQ9NXG6 502 aa12.64□□□□□ -0.39
VPS28-201ENST00000292510 HS3ST3B1Q9Y662 390 aa12.64□□□□□ -0.39
VPS28-201ENST00000292510 IDSB3KWA1 339 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 G3V2L1 256 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 SAP18O00422 153 aaKnown RBP12.63□□□□□ -0.39
VPS28-201ENST00000292510 SOCS6O14544 535 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 CHST10O43529 356 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 PLIN3O60664 434 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 ALOX12BO75342 701 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 CDC123O75794 336 aaPredicted RBP12.63□□□□□ -0.39
VPS28-201ENST00000292510 SUPT7LO94864 414 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 CLDN9O95484 217 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 TGFB1P01137 390 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 PRB1P04280 392 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 HEXBP07686 556 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 CREB1P16220 341 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 MMP11P24347 488 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 NEK2P51955 445 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 PRKAA2P54646 552 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 EMP2P54851 167 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 HERVK_113P63132 956 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 ZRSR2Q15696 482 aaKnown RBP12.63□□□□□ -0.39
VPS28-201ENST00000292510 RBBP7Q16576 425 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 ADPRMQ3LIE5 342 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 MINDY4Q4G0A6 757 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 MFSD4BQ5TF39 518 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 KIRREL2Q6UWL6 708 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 L3MBTL4Q8NA19 623 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 HUS1BQ8NHY5 278 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 TRPC4APQ8TEL6 797 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 PPP4R1Q8TF05 950 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 SLC39A7Q92504 469 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 UBE2E3Q969T4 207 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 SEC16BQ96JE7 1060 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 FAR2Q96K12 515 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 ZIM3Q96PE6 472 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 MTERF1Q99551 399 aaKnown RBP12.63□□□□□ -0.39
VPS28-201ENST00000292510 C1QTNF3Q9BXJ4 246 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 ERVK-6Q9BXR3 956 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 MS4A8Q9BY19 250 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 TGIF2Q9GZN2 237 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 ING2Q9H160 280 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 OR51B5Q9H339 312 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 SEMA3GQ9NS98 782 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 C14orf105Q9NVL8 296 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 MKL2Q9ULH7 1088 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 GRID1Q9ULK0 1009 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 CFAP46Q8IYW2 2715 aa12.63□□□□□ -0.39
VPS28-201ENST00000292510 MED13Q9UHV7 2174 aa12.62□□□□□ -0.39
VPS28-201ENST00000292510 H0YIV9 168 aa12.62□□□□□ -0.39
VPS28-201ENST00000292510 RTCAO00442 366 aaKnown RBP12.62□□□□□ -0.39
VPS28-201ENST00000292510 PEX12O00623 359 aa12.62□□□□□ -0.39
VPS28-201ENST00000292510 UGDHO60701 494 aa12.62□□□□□ -0.39
VPS28-201ENST00000292510 SPAG7O75391 227 aa12.62□□□□□ -0.39
VPS28-201ENST00000292510 MYL2P10916 166 aa12.62□□□□□ -0.39
VPS28-201ENST00000292510 IMPDH1P20839 514 aa12.62□□□□□ -0.39
VPS28-201ENST00000292510 CERS1P27544 350 aa12.62□□□□□ -0.39
VPS28-201ENST00000292510 CCL11P51671 97 aa12.62□□□□□ -0.39
VPS28-201ENST00000292510 RPS13P62277 151 aaKnown RBP12.62□□□□□ -0.39
VPS28-201ENST00000292510 CLCQ05315 142 aa12.62□□□□□ -0.39
VPS28-201ENST00000292510 KCNAB2Q13303 367 aa12.62□□□□□ -0.39
VPS28-201ENST00000292510 RUNX2Q13950 521 aa12.62□□□□□ -0.39
VPS28-201ENST00000292510 CCDC153Q494R4 210 aa12.62□□□□□ -0.39
VPS28-201ENST00000292510 LETMD1Q6P1Q0 360 aa12.62□□□□□ -0.39
VPS28-201ENST00000292510 ABHD17CQ6PCB6 329 aa12.62□□□□□ -0.39
VPS28-201ENST00000292510 ZYG11AQ6WRX3 759 aa12.62□□□□□ -0.39
VPS28-201ENST00000292510 UBE3DQ7Z6J8 389 aa12.62□□□□□ -0.39
VPS28-201ENST00000292510 MILR1Q7Z6M3 343 aa12.62□□□□□ -0.39
VPS28-201ENST00000292510 APLFQ8IW19 511 aaPredicted RBP12.62□□□□□ -0.39
VPS28-201ENST00000292510 IQCKQ8N0W5 287 aa12.62□□□□□ -0.39
VPS28-201ENST00000292510 AMER2Q8N7J2 671 aa12.62□□□□□ -0.39
VPS28-201ENST00000292510 BANPQ8N9N5 519 aa12.62□□□□□ -0.39
VPS28-201ENST00000292510 CCDC63Q8NA47 563 aa12.62□□□□□ -0.39
VPS28-201ENST00000292510 OR2L5Q8NG80 312 aa12.62□□□□□ -0.39
VPS28-201ENST00000292510 OR4F6Q8NGB9 312 aa12.62□□□□□ -0.39
VPS28-201ENST00000292510 WDR20Q8TBZ3 569 aa12.62□□□□□ -0.39
VPS28-201ENST00000292510 MTFMTQ96DP5 389 aaKnown RBP12.62□□□□□ -0.39
VPS28-201ENST00000292510 WBP1Q96G27 269 aa12.62□□□□□ -0.39
VPS28-201ENST00000292510 APOPT1Q96IL0 206 aa12.62□□□□□ -0.39
VPS28-201ENST00000292510 QRFPRQ96P65 431 aa12.62□□□□□ -0.39
VPS28-201ENST00000292510 NTMT1Q9BV86 223 aa12.62□□□□□ -0.39
VPS28-201ENST00000292510 SORBS1Q9BX66 1292 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms