RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 ADNP2Q6IQ32 1131 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 TSPAN33Q86UF1 283 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 TMEM234Q8WY98 164 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 EBF2Q9HAK2 575 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 ZBTB26Q9HCK0 441 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 POFUT2Q9Y2G5 429 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 CHD4Q14839 1912 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 A0A075B6Q4 140 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 WRBO00258 174 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 MXD1Q05195 221 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 KLHL26Q53HC5 615 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 CHERPQ8IWX8 916 aaKnown RBP17.87■□□□□ 0.45
PCDH1-201ENST00000287008 JPH3Q8WXH2 748 aaPredicted RBP17.87■□□□□ 0.45
PCDH1-201ENST00000287008 TBX5Q99593 518 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 GIMAP2Q9UG22 337 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 ADAMTS4O75173 837 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 CREG1O75629 220 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 CEBPBP17676 345 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 SMSP52788 366 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 PON3Q15166 354 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 TECRLQ5HYJ1 363 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.87■□□□□ 0.45
PCDH1-201ENST00000287008 FCGR1BQ92637 280 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 HERPUD2Q9BSE4 406 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 ACTR3BQ9P1U1 418 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 PCDHGB1Q9Y5G3 927 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 ZNF20P17024 532 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 FBLP22087 321 aaKnown RBP17.87■□□□□ 0.45
PCDH1-201ENST00000287008 GMFBP60983 142 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 HNRNPA1L2Q32P51 320 aaKnown RBP17.87■□□□□ 0.45
PCDH1-201ENST00000287008 COLEC12Q5KU26 742 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 RNF130Q86XS8 419 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 OR5P2Q8WZ92 322 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 MTG2Q9H4K7 406 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 TRPV5Q9NQA5 729 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 ZNF222Q9UK12 451 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 RIMKLBQ9ULI2 386 aa17.87■□□□□ 0.45
PCDH1-201ENST00000287008 TFECO14948 347 aaPredicted RBP17.86■□□□□ 0.45
PCDH1-201ENST00000287008 TIA1P31483 386 aaKnown RBP eCLIP17.86■□□□□ 0.45
PCDH1-201ENST00000287008 RPS15AP62244 130 aaKnown RBP17.86■□□□□ 0.45
PCDH1-201ENST00000287008 MPP7Q5T2T1 576 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 ZC3H14Q6PJT7 736 aaKnown RBP17.86■□□□□ 0.45
PCDH1-201ENST00000287008 C3orf58Q8NDZ4 430 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 CLSTN3Q9BQT9 956 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 PIGUQ9H490 435 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 WASF2Q9Y6W5 498 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 E7ESA3 106 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 RFPL1O75677 317 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 GRM7Q14831 915 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 CRTC1Q6UUV9 634 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 PHTF2Q8N3S3 785 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 OR2L5Q8NG80 312 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 KAT8Q9H7Z6 458 aaKnown RBP17.86■□□□□ 0.45
PCDH1-201ENST00000287008 CD320Q9NPF0 282 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 OAZ3Q9UMX2 235 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 A6NCN8 305 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 ZNF208O43345 1280 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 NPPAP01160 153 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 CXCL12P48061 93 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 DOC2AQ14183 400 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 ANKRD26P1Q6NSI1 321 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 GJD2Q9UKL4 321 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 MAP3K8P41279 467 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 DIO3P55073 304 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 CHRDL2Q6WN34 429 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 ZNF784Q8NCA9 323 aaPredicted RBP17.86■□□□□ 0.45
PCDH1-201ENST00000287008 NR4A3Q92570 626 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 ZNF778Q96MU6 729 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 TMEM74Q96NL1 305 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 MCHR1Q99705 422 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 GAL3ST1Q99999 423 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 ZNF717Q9BY31 904 aaPredicted RBP17.86■□□□□ 0.45
PCDH1-201ENST00000287008 CXorf21Q9HAI6 301 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 TMEM5Q9Y2B1 443 aa17.86■□□□□ 0.45
PCDH1-201ENST00000287008 F5P12259 2224 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 SDC3O75056 442 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 ARSAP15289 507 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 ENDOUP21128 410 aaKnown RBP17.85■□□□□ 0.45
PCDH1-201ENST00000287008 FPR1P21462 350 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 HSD11B1P28845 292 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 ARHGDIBP52566 201 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 PPP1R8Q12972 351 aaKnown RBP17.85■□□□□ 0.45
PCDH1-201ENST00000287008 SLAMF1Q13291 335 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 ZNF234Q14588 700 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 FLYWCH1Q4VC44 716 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 RABL3Q5HYI8 236 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 SLC46A2Q9BY10 475 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 RMI1Q9H9A7 625 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 TAS2R7Q9NYW3 318 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 BLOC1S5-TXNDC5H3BN57 136 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 CD9P21926 228 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 OR4D2P58180 307 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 AP3S2P59780 193 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 NFE2L1Q14494 772 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 RANBP10Q6VN20 620 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 ZNF550Q7Z398 422 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 TP53INP2Q8IXH6 220 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 TSPEARQ8WU66 669 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 NKD1Q969G9 470 aa17.85■□□□□ 0.45
PCDH1-201ENST00000287008 CITO14578 2027 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms