RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 CBLL1Q75N03 491 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 TAS2R42Q7RTR8 314 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 ZNF367Q7RTV3 350 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 LIX1LQ8IVB5 337 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 CCDC103Q8IW40 242 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 ENTHD1Q8IYW4 607 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 CLIP4Q8N3C7 705 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 LIX1Q8N485 282 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 DNAJC22Q8N4W6 341 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 SIDT2Q8NBJ9 832 aaKnown RBP9.94□□□□□ -0.82
UPF3B-201ENST00000276201 GRPEL2Q8TAA5 225 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 TRIM63Q969Q1 353 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 DHRS1Q96LJ7 313 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 COPS4Q9BT78 406 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 TRAF4Q9BUZ4 470 aaPredicted RBP9.94□□□□□ -0.82
UPF3B-201ENST00000276201 RACGAP1Q9H0H5 632 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 ZBTB20Q9HC78 741 aaPredicted RBP9.94□□□□□ -0.82
UPF3B-201ENST00000276201 CFL2Q9Y281 166 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 OARD1Q9Y530 152 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 SLC35F4A4IF30 521 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 HMX3A6NHT5 357 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 CLCA1A8K7I4 914 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 PCDHGA12O60330 932 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 SP9P0CG40 484 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 ITGA2P17301 1181 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 TNFRSF4P43489 277 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 DGKGP49619 791 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 OR2B6P58173 313 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 RPP38P78345 283 aaKnown RBP9.94□□□□□ -0.82
UPF3B-201ENST00000276201 CSTF1Q05048 431 aaKnown RBP9.94□□□□□ -0.82
UPF3B-201ENST00000276201 VEZF1Q14119 521 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 IQCCQ4KMZ1 466 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 IL31Q6EBC2 164 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 TSSK4Q6SA08 328 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 GALNT5Q7Z7M9 940 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 ZSWIM9Q86XI8 627 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 DENND6BQ8NEG7 585 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 OR4K2Q8NGD2 314 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 RPLP0P6Q8NHW5 317 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 WDFY2Q96P53 400 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 SDHCQ99643 169 aaPredicted RBP9.94□□□□□ -0.82
UPF3B-201ENST00000276201 TBCDQ9BTW9 1192 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 NUAK2Q9H093 628 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 IPPKQ9H8X2 491 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 RDH14Q9HBH5 336 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 EHD3Q9NZN3 535 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 FBXO4Q9UKT5 387 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 HCN2Q9UL51 889 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 PCDHGA6Q9Y5G7 932 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 SPO11Q9Y5K1 396 aa9.94□□□□□ -0.82
UPF3B-201ENST00000276201 TBC1D3BA6NDS4 549 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 NCF1BA6NI72 391 aaPredicted RBP9.93□□□□□ -0.82
UPF3B-201ENST00000276201 NCF1CA8MVU1 366 aaPredicted RBP9.93□□□□□ -0.82
UPF3B-201ENST00000276201 MANBAO00462 879 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 PRMT3O60678 531 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 NIPSNAP2O75323 286 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 MAPK1P28482 360 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 S100A3P33764 101 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 SOX6P35712 828 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 KIR2DL1P43626 348 aaPredicted RBP9.93□□□□□ -0.82
UPF3B-201ENST00000276201 CXCL12P48061 93 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 ALDH9A1P49189 494 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 C21orf58P58505 322 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 NHLH1Q02575 133 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 GALNT3Q14435 633 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 PTGR1Q14914 329 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 INO80DQ53TQ3 878 aaPredicted RBP9.93□□□□□ -0.82
UPF3B-201ENST00000276201 C2orf27AQ580R0 203 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 SPANXN2Q5MJ10 180 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 RAP1GAP2Q684P5 730 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 AHSA2Q719I0 299 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 ST6GAL2Q96JF0 529 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 FCRL1Q96LA6 429 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 BARD1Q99728 777 aaKnown RBP9.93□□□□□ -0.82
UPF3B-201ENST00000276201 FAM86C1Q9NVL1 165 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 PDP1Q9P0J1 537 aaPredicted RBP9.93□□□□□ -0.82
UPF3B-201ENST00000276201 SPASTQ9UBP0 616 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 EVLQ9UI08 416 aaPredicted RBP9.93□□□□□ -0.82
UPF3B-201ENST00000276201 ABCG2Q9UNQ0 655 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 SLC27A6Q9Y2P4 619 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 A8MU76 341 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 PDZK1P1A8MUH7 402 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 FAM25AB3EWG3 89 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 FAM25CB3EWG5 89 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 FAM25GB3EWG6 89 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 PRRT4C9JH25 899 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 K7ESF4 209 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 FFAR2O15552 330 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 SEC14L5O43304 696 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 TBL1XO60907 577 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 PGLSO95336 258 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 PRSS56P0CW18 603 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 BCKDHAP12694 445 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 CR2P20023 1033 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 TACR2P21452 398 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 GNG2P59768 71 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 RPS14P62263 151 aaKnown RBP9.93□□□□□ -0.82
UPF3B-201ENST00000276201 RPS24P62847 133 aaKnown RBP9.93□□□□□ -0.82
UPF3B-201ENST00000276201 BNC1Q01954 994 aa9.93□□□□□ -0.82
UPF3B-201ENST00000276201 CAMK2GQ13555 558 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms