RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 CACNG3O60359 315 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 HPGDSO60760 199 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 NAGAP17050 411 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 IL32P24001 234 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 TIGD5Q53EQ6 642 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 MTFR2Q6P444 385 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 BHLHB9Q6PI77 547 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 PDZD3Q86UT5 571 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 IFNL1Q8IU54 200 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 BBS7Q8IWZ6 715 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 C3orf58Q8NDZ4 430 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 TMEM121BQ9BXQ6 578 aaPredicted RBP12.35□□□□□ -0.43
HERC6-202ENST00000273960 SAV1Q9H4B6 383 aaPredicted RBP12.35□□□□□ -0.43
HERC6-202ENST00000273960 HHATLQ9HCP6 504 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 TMCC3Q9ULS5 477 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 SSR3Q9UNL2 185 aa12.35□□□□□ -0.43
HERC6-202ENST00000273960 TNPO3Q9Y5L0 923 aaKnown RBP12.35□□□□□ -0.43
HERC6-202ENST00000273960 PRR23AA6NEV1 266 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 INMT-MINDY4F8WBC2 141 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 IFRD1O00458 451 aaPredicted RBP12.34□□□□□ -0.43
HERC6-202ENST00000273960 SUV39H1O43463 412 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 TPST2O60704 377 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 ENTPD6O75354 484 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 ALDH1A1P00352 501 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 PROS1P07225 676 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 ARSBP15848 533 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 CSTF2P33240 577 aaKnown RBP eCLIP12.34□□□□□ -0.43
HERC6-202ENST00000273960 CRATP43155 626 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 ARHGDIBP52566 201 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 CTBP2P56545 445 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 OLR1P78380 273 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 RHAGQ02094 409 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 BCL2L1Q07817 233 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 EFEMP1Q12805 493 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 ZSWIM7Q19AV6 140 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 PTRHD1Q6GMV3 140 aaKnown RBP12.34□□□□□ -0.43
HERC6-202ENST00000273960 FAM122CQ6P4D5 195 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 KIAA1324Q6UXG2 1013 aaKnown RBP12.34□□□□□ -0.43
HERC6-202ENST00000273960 CCDC149Q6ZUS6 474 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 OPALINQ96PE5 141 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 TCF25Q9BQ70 676 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 MIXL1Q9H2W2 232 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 NKIRAS2Q9NYR9 191 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 PPT2Q9UMR5 302 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 TRPV2Q9Y5S1 764 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 PIPSLA2A3N6 862 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 TRIM77I1YAP6 450 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 FFAR2O15552 330 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 OTCP00480 354 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 PLATP00750 562 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 C1QBP02746 253 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 CCND3P30281 292 aaPredicted RBP12.34□□□□□ -0.43
HERC6-202ENST00000273960 RPS5P46782 204 aaKnown RBP12.34□□□□□ -0.43
HERC6-202ENST00000273960 INSL4Q14641 139 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 VMACQ2NL98 169 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 MPPE1Q53F39 396 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 ZNF467Q7Z7K2 595 aaPredicted RBP12.34□□□□□ -0.43
HERC6-202ENST00000273960 ATCAYQ86WG3 371 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 TAGAPQ8N103 731 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 NKAPQ8N5F7 415 aaKnown RBP12.34□□□□□ -0.43
HERC6-202ENST00000273960 REPS1Q96D71 796 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 RAI2Q9Y5P3 530 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 SPIN1Q9Y657 262 aaPredicted RBP12.34□□□□□ -0.43
HERC6-202ENST00000273960 FAM220BPB1ANY3 271 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 LGALS8O00214 317 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 CCNB2O95067 398 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 MAP2K6P52564 334 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 TSTA3Q13630 321 aaPredicted RBP12.34□□□□□ -0.43
HERC6-202ENST00000273960 ZBTB6Q15916 424 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 CRTC2Q53ET0 693 aaPredicted RBP12.34□□□□□ -0.43
HERC6-202ENST00000273960 UBXN11Q5T124 520 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 CNIH2Q6PI25 160 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 SPATA2LQ8IUW3 424 aaPredicted RBP12.34□□□□□ -0.43
HERC6-202ENST00000273960 SDR16C5Q8N3Y7 309 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 LINC01465Q8N7H1 131 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 RTL3Q8N8U3 475 aaKnown RBP12.34□□□□□ -0.43
HERC6-202ENST00000273960 SETD6Q8TBK2 473 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 CHIAQ9BZP6 476 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 MAGIXQ9H6Y5 334 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 ASAH2Q9NR71 780 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 ELOVL2Q9NXB9 296 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 EIF3KQ9UBQ5 218 aaKnown RBP12.34□□□□□ -0.43
HERC6-202ENST00000273960 NUP50Q9UKX7 468 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 MRPS7Q9Y2R9 242 aaKnown RBP12.34□□□□□ -0.43
HERC6-202ENST00000273960 HSPE1-MOB4S4R3N1 261 aa12.34□□□□□ -0.43
HERC6-202ENST00000273960 BRCA1P38398 1863 aaKnown RBP12.33□□□□□ -0.44
HERC6-202ENST00000273960 SHOXO15266 292 aa12.33□□□□□ -0.44
HERC6-202ENST00000273960 STAU1O95793 577 aaKnown RBP12.33□□□□□ -0.44
HERC6-202ENST00000273960 NNMTP40261 264 aa12.33□□□□□ -0.44
HERC6-202ENST00000273960 RPL35P42766 123 aaKnown RBP12.33□□□□□ -0.44
HERC6-202ENST00000273960 EPHA5P54756 1037 aa12.33□□□□□ -0.44
HERC6-202ENST00000273960 ABHD18Q0P651 414 aa12.33□□□□□ -0.44
HERC6-202ENST00000273960 ATG9BQ674R7 924 aa12.33□□□□□ -0.44
HERC6-202ENST00000273960 USP30Q70CQ3 517 aa12.33□□□□□ -0.44
HERC6-202ENST00000273960 WDR53Q7Z5U6 358 aaPredicted RBP12.33□□□□□ -0.44
HERC6-202ENST00000273960 CD200R1Q8TD46 325 aa12.33□□□□□ -0.44
HERC6-202ENST00000273960 OTULINQ96BN8 352 aa12.33□□□□□ -0.44
HERC6-202ENST00000273960 MED28Q9H204 178 aa12.33□□□□□ -0.44
HERC6-202ENST00000273960 KIAA0100Q14667 2235 aaKnown RBP12.33□□□□□ -0.44
HERC6-202ENST00000273960 CTPS1P17812 591 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms