RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 GMEB1Q9Y692 573 aa15.61■□□□□ 0.09
TPM1-201ENST00000267996 THADAQ6YHU6 1953 aa15.61■□□□□ 0.09
TPM1-201ENST00000267996 A0A0A6YYD5 115 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 GSAPA4D1B5 854 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 OR5K3A6NET4 321 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 RNASET2O00584 256 aaKnown RBP15.6■□□□□ 0.09
TPM1-201ENST00000267996 AQP9O43315 295 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 NOBOXO60393 691 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 IL3P08700 152 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 MAGP20916 626 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 ATP6V1B2P21281 511 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 MAPK12P53778 367 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 TRA2BP62995 288 aaKnown RBP15.6■□□□□ 0.09
TPM1-201ENST00000267996 MC1RQ01726 317 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 RHDQ02161 417 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 FCRL6Q6DN72 434 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 OR4C11Q6IEV9 310 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 FIGLAQ6QHK4 219 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 DNAJC14Q6Y2X3 702 aaPredicted RBP15.6■□□□□ 0.09
TPM1-201ENST00000267996 VN1R4Q7Z5H5 301 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 SPATA24Q86W54 205 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 ARL14Q8N4G2 192 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 GOLM1Q8NBJ4 401 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 TM4SF19Q96DZ7 209 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 THAP11Q96EK4 314 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 ZNF764Q96H86 408 aaPredicted RBP15.6■□□□□ 0.09
TPM1-201ENST00000267996 GBP5Q96PP8 586 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 SLC6A16Q9GZN6 736 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 KLHL31Q9H511 634 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 ERVMER34-1Q9H9K5 563 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 ATAD3AQ9NVI7 634 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 HRASLS2Q9NWW9 162 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 PCDHB3Q9Y5E6 796 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 SNX13Q9Y5W8 968 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 AQP12BA6NM10 295 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 TMPRSS11DO60235 418 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 SERPIND1P05546 499 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 ZCCHC18P0CG32 403 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 LSSP48449 732 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 PTDSS1P48651 473 aaKnown RBP15.6■□□□□ 0.09
TPM1-201ENST00000267996 ATXN3P54252 364 aaPredicted RBP15.6■□□□□ 0.09
TPM1-201ENST00000267996 MAZP56270 477 aaKnown RBP15.6■□□□□ 0.09
TPM1-201ENST00000267996 C21orf59P57076 290 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 MRPS22P82650 360 aaKnown RBP15.6■□□□□ 0.09
TPM1-201ENST00000267996 KLC1Q07866 573 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 MPEG1Q2M385 716 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 TJAP1Q5JTD0 557 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 ABHD17CQ6PCB6 329 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 CALHM3Q86XJ0 350 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 AQP12AQ8IXF9 295 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 CLECL1Q8IZS7 167 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 VPS37AQ8NEZ2 397 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 OR2L5Q8NG80 312 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 NT5CQ8TCD5 201 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 PPCDCQ96CD2 204 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 TEFMQ96QE5 360 aaKnown RBP15.6■□□□□ 0.09
TPM1-201ENST00000267996 OR2A5Q96R48 311 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 ECSITQ9BQ95 431 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 TRIM15Q9C019 465 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 KAT8Q9H7Z6 458 aaKnown RBP15.6■□□□□ 0.09
TPM1-201ENST00000267996 EVA1BQ9NVM1 165 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 SH3BP4Q9P0V3 963 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 EGFL7Q9UHF1 273 aa15.6■□□□□ 0.09
TPM1-201ENST00000267996 A0A0J9YY10 115 aa15.59■□□□□ 0.09
TPM1-201ENST00000267996 ARHGAP10A1A4S6 786 aa15.59■□□□□ 0.09
TPM1-201ENST00000267996 LILRA5A6NI73 299 aa15.59■□□□□ 0.09
TPM1-201ENST00000267996 ARPC2O15144 300 aa15.59■□□□□ 0.09
TPM1-201ENST00000267996 PPM1DO15297 605 aa15.59■□□□□ 0.09
TPM1-201ENST00000267996 CTSVO60911 334 aa15.59■□□□□ 0.09
TPM1-201ENST00000267996 PIAS2O75928 621 aa15.59■□□□□ 0.09
TPM1-201ENST00000267996 STAMBPO95630 424 aa15.59■□□□□ 0.09
TPM1-201ENST00000267996 GSNP06396 782 aa15.59■□□□□ 0.09
TPM1-201ENST00000267996 DDCP20711 480 aa15.59■□□□□ 0.09
TPM1-201ENST00000267996 TSFMP43897 325 aaKnown RBP15.59■□□□□ 0.09
TPM1-201ENST00000267996 GZMMP51124 257 aa15.59■□□□□ 0.09
TPM1-201ENST00000267996 OR4D2P58180 307 aa15.59■□□□□ 0.09
TPM1-201ENST00000267996 PRSS53Q2L4Q9 553 aa15.59■□□□□ 0.09
TPM1-201ENST00000267996 MUM1Q2TAK8 710 aa15.59■□□□□ 0.09
TPM1-201ENST00000267996 IRAK1BP1Q5VVH5 260 aa15.59■□□□□ 0.09
TPM1-201ENST00000267996 ZNF793Q6ZN11 406 aa15.59■□□□□ 0.09
TPM1-201ENST00000267996 IFNEQ86WN2 208 aa15.59■□□□□ 0.09
TPM1-201ENST00000267996 OOSP2Q86WS3 158 aa15.59■□□□□ 0.09
TPM1-201ENST00000267996 AMER3Q8N944 861 aa15.59■□□□□ 0.09
TPM1-201ENST00000267996 SRFBP1Q8NEF9 429 aaKnown RBP15.59■□□□□ 0.09
TPM1-201ENST00000267996 GOT1L1Q8NHS2 421 aaPredicted RBP15.59■□□□□ 0.09
TPM1-201ENST00000267996 BAHD1Q8TBE0 780 aaPredicted RBP15.59■□□□□ 0.09
TPM1-201ENST00000267996 NRG4Q8WWG1 115 aa15.59■□□□□ 0.09
TPM1-201ENST00000267996 NECAB3Q96P71 396 aaPredicted RBP15.59■□□□□ 0.09
TPM1-201ENST00000267996 PANX1Q96RD7 426 aa15.59■□□□□ 0.09
TPM1-201ENST00000267996 THUMPD3Q9BV44 507 aaKnown RBP15.59■□□□□ 0.09
TPM1-201ENST00000267996 PRDM7Q9NQW5 492 aa15.59■□□□□ 0.09
TPM1-201ENST00000267996 DOLKQ9UPQ8 538 aa15.59■□□□□ 0.09
TPM1-201ENST00000267996 USP22Q9UPT9 525 aa15.59■□□□□ 0.09
TPM1-201ENST00000267996 NUP214P35658 2090 aaPredicted RBP15.59■□□□□ 0.09
TPM1-201ENST00000267996 C4orf51C9J302 202 aa15.58■□□□□ 0.08
TPM1-201ENST00000267996 GPR37L1O60883 481 aa15.58■□□□□ 0.08
TPM1-201ENST00000267996 BAG2O95816 211 aa15.58■□□□□ 0.08
TPM1-201ENST00000267996 CTSKP43235 329 aa15.58■□□□□ 0.08
TPM1-201ENST00000267996 PLA2G16P53816 162 aa15.58■□□□□ 0.08
TPM1-201ENST00000267996 TOR1AIP1Q5JTV8 583 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms