RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 ZNF547Q8IVP9 402 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 C11orf65Q8NCR3 313 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 SPPL2AQ8TCT8 520 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 C16orf78Q8WTQ4 265 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 ABTB1Q969K4 478 aaPredicted RBP12.37□□□□□ -0.43
CPSF6-201ENST00000266679 C7orf34Q96L11 122 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 SLC35A5Q9BS91 424 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 EFCAB11Q9BUY7 163 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 TMEM121BQ9BXQ6 578 aaPredicted RBP12.37□□□□□ -0.43
CPSF6-201ENST00000266679 LMAN2LQ9H0V9 348 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 RUBCNLQ9H714 662 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 ZDHHC4Q9NPG8 344 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 CCDC177Q9NQR7 707 aaPredicted RBP12.37□□□□□ -0.43
CPSF6-201ENST00000266679 PSME2Q9UL46 239 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 ZNF451Q9Y4E5 1061 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 DGKBQ9Y6T7 804 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 ZNF99A8MXY4 864 aaPredicted RBP12.37□□□□□ -0.43
CPSF6-201ENST00000266679 FAM20BO75063 409 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 NDUFS2O75306 463 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 JRKO75564 520 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 POP7O75817 140 aaKnown RBP12.37□□□□□ -0.43
CPSF6-201ENST00000266679 ADRB3P13945 408 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 FSHRP23945 695 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 RRM2P31350 389 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 RANBP1P43487 201 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 AQP6Q13520 282 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 SMN1Q16637 294 aaKnown RBP12.37□□□□□ -0.43
CPSF6-201ENST00000266679 NXPE4Q6UWF7 544 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 CCDC81Q6ZN84 652 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 FAM83HQ6ZRV2 1179 aaPredicted RBP12.37□□□□□ -0.43
CPSF6-201ENST00000266679 SLC16A12Q6ZSM3 486 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 RTL10Q7L3V2 364 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 PIWIL3Q7Z3Z3 882 aaKnown RBP12.37□□□□□ -0.43
CPSF6-201ENST00000266679 CROCCP3Q8IVE0 287 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 LAS2Q8IYD9 372 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 C12orf76Q8N812 135 aaPredicted RBP12.37□□□□□ -0.43
CPSF6-201ENST00000266679 ZNF740Q8NDX6 193 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 OR5AK3PQ8NH89 298 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 MIPOL1Q8TD10 442 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 FAR1Q8WVX9 515 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 PPCDCQ96CD2 204 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 CXorf40BQ96DE9 158 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 WDR34Q96EX3 536 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 APOL4Q9BPW4 351 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 RHNO1Q9BSD3 238 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 SORBS1Q9BX66 1292 aaKnown RBP12.37□□□□□ -0.43
CPSF6-201ENST00000266679 GPN2Q9H9Y4 310 aaPredicted RBP12.37□□□□□ -0.43
CPSF6-201ENST00000266679 GALNT8Q9NY28 637 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 SPASTQ9UBP0 616 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 SLC27A6Q9Y2P4 619 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 TESMINQ9Y4I5 508 aa12.37□□□□□ -0.43
CPSF6-201ENST00000266679 PCYT1BQ9Y5K3 369 aaPredicted RBP12.37□□□□□ -0.43
CPSF6-201ENST00000266679 EDDM13A0A1B0GTR0 161 aa12.36□□□□□ -0.43
CPSF6-201ENST00000266679 FAM86C2PA6NEL3 165 aa12.36□□□□□ -0.43
CPSF6-201ENST00000266679 FOXE1O00358 373 aaPredicted RBP12.36□□□□□ -0.43
CPSF6-201ENST00000266679 PFDN1O60925 122 aa12.36□□□□□ -0.43
CPSF6-201ENST00000266679 GCM2O75603 506 aaPredicted RBP12.36□□□□□ -0.43
CPSF6-201ENST00000266679 KLK1P06870 262 aa12.36□□□□□ -0.43
CPSF6-201ENST00000266679 FURINP09958 794 aa12.36□□□□□ -0.43
CPSF6-201ENST00000266679 SOAT1P35610 550 aa12.36□□□□□ -0.43
CPSF6-201ENST00000266679 GSSP48637 474 aa12.36□□□□□ -0.43
CPSF6-201ENST00000266679 TAS2R50P59544 299 aa12.36□□□□□ -0.43
CPSF6-201ENST00000266679 TAP2Q03519 686 aa12.36□□□□□ -0.43
CPSF6-201ENST00000266679 EMX1Q04741 257 aaPredicted RBP12.36□□□□□ -0.43
CPSF6-201ENST00000266679 COL19A1Q14993 1142 aa12.36□□□□□ -0.43
CPSF6-201ENST00000266679 IQCCQ4KMZ1 466 aa12.36□□□□□ -0.43
CPSF6-201ENST00000266679 GCNT6Q5T4J0 391 aa12.36□□□□□ -0.43
CPSF6-201ENST00000266679 FAHD1Q6P587 224 aa12.36□□□□□ -0.43
CPSF6-201ENST00000266679 GALNT18Q6P9A2 607 aa12.36□□□□□ -0.43
CPSF6-201ENST00000266679 ZNF765Q7L2R6 523 aa12.36□□□□□ -0.43
CPSF6-201ENST00000266679 ETFBKMTQ8IXQ9 262 aa12.36□□□□□ -0.43
CPSF6-201ENST00000266679 LRRC56Q8IYG6 542 aaPredicted RBP12.36□□□□□ -0.43
CPSF6-201ENST00000266679 NFKBIDQ8NI38 313 aa12.36□□□□□ -0.43
CPSF6-201ENST00000266679 FNDC8Q8TC99 324 aa12.36□□□□□ -0.43
CPSF6-201ENST00000266679 FKBP10Q96AY3 582 aa12.36□□□□□ -0.43
CPSF6-201ENST00000266679 RAD21L1Q9H4I0 556 aa12.36□□□□□ -0.43
CPSF6-201ENST00000266679 TRIM39Q9HCM9 518 aa12.36□□□□□ -0.43
CPSF6-201ENST00000266679 ATAD3AQ9NVI7 634 aa12.36□□□□□ -0.43
CPSF6-201ENST00000266679 GPATCH2Q9NW75 528 aa12.36□□□□□ -0.43
CPSF6-201ENST00000266679 ENPP5Q9UJA9 477 aa12.36□□□□□ -0.43
CPSF6-201ENST00000266679 TMEM98Q9Y2Y6 226 aa12.36□□□□□ -0.43
CPSF6-201ENST00000266679 TPRKBQ9Y3C4 175 aa12.36□□□□□ -0.43
CPSF6-201ENST00000266679 DENND4AQ7Z401 1863 aa12.36□□□□□ -0.43
CPSF6-201ENST00000266679 TMEM229AB2RXF0 380 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 PAPLNO95428 1278 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 TFPTP0C1Z6 253 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 MAD2L1BPQ15013 274 aaPredicted RBP12.35□□□□□ -0.43
CPSF6-201ENST00000266679 NPTX1Q15818 432 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 PRSS53Q2L4Q9 553 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 MPEG1Q2M385 716 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 HNRNPA1L2Q32P51 320 aaKnown RBP12.35□□□□□ -0.43
CPSF6-201ENST00000266679 PRAMEF14Q5SWL7 426 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 PRAMEF13Q5VWM6 474 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 KIAA1614Q5VZ46 1190 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 MMP21Q8N119 569 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 TMIEQ8NEW7 156 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 BORCS5Q969J3 196 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 EPYCQ99645 322 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 NRTNQ99748 197 aa12.35□□□□□ -0.43
CPSF6-201ENST00000266679 DOHHQ9BU89 302 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms