RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 FBXO15Q8NCQ5 510 aaPredicted RBP11.95□□□□□ -0.5
BEST3-201ENST00000266661 C11orf65Q8NCR3 313 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 BTN2A2Q8WVV5 523 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 GGHQ92820 318 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 TPD52L3Q96J77 140 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 VPS35Q96QK1 796 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 FEVQ99581 238 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 RIOK2Q9BVS4 552 aaKnown RBP11.95□□□□□ -0.5
BEST3-201ENST00000266661 BHLHE41Q9C0J9 482 aaPredicted RBP11.95□□□□□ -0.5
BEST3-201ENST00000266661 SMG9Q9H0W8 520 aaKnown RBP11.95□□□□□ -0.5
BEST3-201ENST00000266661 DSN1Q9H410 356 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 THSD1Q9NS62 852 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 ZNF226Q9NYT6 803 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 KIF17Q9P2E2 1029 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 GULP1Q9UBP9 304 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 ZNF282Q9UDV7 671 aaPredicted RBP11.95□□□□□ -0.5
BEST3-201ENST00000266661 SLC25A13Q9UJS0 675 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 VPS4AQ9UN37 437 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 NUP214P35658 2090 aaPredicted RBP11.95□□□□□ -0.5
BEST3-201ENST00000266661 A0A1W2PRU2 124 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 METTL15A6NJ78 407 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 OR2AG2A6NM03 316 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 EFCAB9A8MZ26 197 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 QSOX1O00391 747 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 TGM5O43548 720 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 TSPAN6O43657 245 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 SLC16A8O95907 504 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 CDK1P06493 297 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 ALOX5P09917 674 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 CYP2A6P11509 494 aaPredicted RBP11.95□□□□□ -0.5
BEST3-201ENST00000266661 PABPC1P11940 636 aaKnown RBP11.95□□□□□ -0.5
BEST3-201ENST00000266661 HLA-EP13747 358 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 TPP2P29144 1249 aaPredicted RBP11.95□□□□□ -0.5
BEST3-201ENST00000266661 ETV3P41162 512 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 MAGEA8P43361 318 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 RXRGP48443 463 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 PRLHRP49683 370 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 PPP5CP53041 499 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 CD300CQ08708 224 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 DDX39BQ13838 428 aaKnown RBP11.95□□□□□ -0.5
BEST3-201ENST00000266661 GRIN2CQ14957 1233 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 GPR153Q6NV75 609 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 PLEKHG7Q6ZR37 379 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 ADCK1Q86TW2 530 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 OR52N2Q8NGI0 321 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 MRGPRX3Q96LB0 322 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 KCNC2Q96PR1 638 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 COPS4Q9BT78 406 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 ZNF576Q9H609 170 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.95□□□□□ -0.5
BEST3-201ENST00000266661 C1GALT1Q9NS00 363 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 RLIMQ9NVW2 624 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 CCL26Q9Y258 94 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 A3GALT2U3KPV4 340 aa11.95□□□□□ -0.5
BEST3-201ENST00000266661 CLCA1A8K7I4 914 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 TNFRSF11BO00300 401 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 FOXE1O00358 373 aaPredicted RBP11.94□□□□□ -0.5
BEST3-201ENST00000266661 AQP9O43315 295 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 RECKO95980 971 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 CD40LGP29965 261 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 C21orf33P30042 268 aaPredicted RBP11.94□□□□□ -0.5
BEST3-201ENST00000266661 GRK5P34947 590 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 CCR2P41597 374 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 BDKRB1P46663 353 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 PREPP48147 710 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 HMGA2P52926 109 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 RPS13P62277 151 aaKnown RBP11.94□□□□□ -0.5
BEST3-201ENST00000266661 TUBA1BP68363 451 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 HBA1P69905 142 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 RBBP4Q09028 425 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 ELP6Q0PNE2 266 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 PRSS53Q2L4Q9 553 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 TUBA1AQ71U36 451 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 ARMCX6Q7L4S7 300 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 PAGE2Q7Z2X7 111 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 ZNF605Q86T29 641 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 RAVER1Q8IY67 606 aaKnown RBP11.94□□□□□ -0.5
BEST3-201ENST00000266661 LAS2Q8IYD9 372 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 VPS37AQ8NEZ2 397 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 NEIL2Q969S2 332 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 HEPHQ9BQS7 1158 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 ZSCAN5AQ9BUG6 496 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 TMEM38AQ9H6F2 299 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 REEP4Q9H6H4 257 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 EPS8L2Q9H6S3 715 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 ATAD3AQ9NVI7 634 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 SCHIP1Q9P0W5 487 aaPredicted RBP11.94□□□□□ -0.5
BEST3-201ENST00000266661 ZNF451Q9Y4E5 1061 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 PCDHGA3Q9Y5H0 932 aa11.94□□□□□ -0.5
BEST3-201ENST00000266661 DSCR3O14972 297 aa11.93□□□□□ -0.5
BEST3-201ENST00000266661 ADAMDEC1O15204 470 aa11.93□□□□□ -0.5
BEST3-201ENST00000266661 CATP04040 527 aaKnown RBP11.93□□□□□ -0.5
BEST3-201ENST00000266661 CTSLP07711 333 aa11.93□□□□□ -0.5
BEST3-201ENST00000266661 ETFAP13804 333 aa11.93□□□□□ -0.5
BEST3-201ENST00000266661 ANXA8P13928 327 aa11.93□□□□□ -0.5
BEST3-201ENST00000266661 LAG3P18627 525 aa11.93□□□□□ -0.5
BEST3-201ENST00000266661 PTX3P26022 381 aaPredicted RBP11.93□□□□□ -0.5
BEST3-201ENST00000266661 AQP1P29972 269 aa11.93□□□□□ -0.5
BEST3-201ENST00000266661 CTNNB1P35222 781 aa11.93□□□□□ -0.5
BEST3-201ENST00000266661 PNLIPRP1P54315 467 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms