RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 DFNA5O60443 496 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 CSTF2P33240 577 aaKnown RBP eCLIP14.85□□□□□ -0.03
TIMP3-201ENST00000266085 GJA8P48165 433 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 SH3BP2P78314 561 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 KCNC4Q03721 635 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 FAM214AQ32MH5 1076 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 ATG9BQ674R7 924 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 GPR26Q8NDV2 337 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 STON2Q8WXE9 905 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 SLC22A12Q96S37 553 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 APOBEC3BQ9UH17 382 aaKnown RBP14.85□□□□□ -0.03
TIMP3-201ENST00000266085 C2orf74A8MZ97 194 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 SNNO75324 88 aaPredicted RBP14.85□□□□□ -0.03
TIMP3-201ENST00000266085 CD2P06729 351 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 GSTM4Q03013 218 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 GALNT1Q10472 559 aaPredicted RBP14.85□□□□□ -0.03
TIMP3-201ENST00000266085 NPTX1Q15818 432 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 INAVAQ3KP66 663 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 OGFOD2Q6N063 350 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 SLC29A4Q7RTT9 530 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 LRRC17Q8N6Y2 441 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 OR4K14Q8NGD5 310 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 GRHL3Q8TE85 626 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 SMIM14Q96QK8 99 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 HSFX1Q9UBD0 423 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 PCDHGB7Q9Y5F8 929 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 PEX16Q9Y5Y5 336 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 A0A096LPI6 279 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 OR6C74A6NCV1 312 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 SAGE2PA6NJ88 616 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 CLDN25C9JDP6 229 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 LDOC1O95751 146 aaPredicted RBP14.85□□□□□ -0.03
TIMP3-201ENST00000266085 SLC16A8O95907 504 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 KLK3P07288 261 aaPredicted RBP14.85□□□□□ -0.03
TIMP3-201ENST00000266085 MATN1P21941 496 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 VSX2P58304 361 aaPredicted RBP14.85□□□□□ -0.03
TIMP3-201ENST00000266085 ABATP80404 500 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 MYBPC3Q14896 1274 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 CBARPQ8N350 705 aaPredicted RBP14.85□□□□□ -0.03
TIMP3-201ENST00000266085 MYLIPQ8WY64 445 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 UFD1Q92890 307 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 ALPK1Q96QP1 1244 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 LYARQ9NX58 379 aaKnown RBP14.85□□□□□ -0.03
TIMP3-201ENST00000266085 COMMD9Q9P000 198 aa14.85□□□□□ -0.03
TIMP3-201ENST00000266085 IDH3BO43837 385 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 SNX4O95219 450 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 CXCR1P25024 350 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 HLA-FP30511 346 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 MGAT3Q09327 533 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 DEFB134Q4QY38 66 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 KIAA1161Q6NSJ0 714 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 KRTCAP2Q8N6L1 136 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 MDGA1Q8NFP4 955 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 ARRDC2Q8TBH0 407 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 SMPDL3BQ92485 455 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 FAM3CQ92520 227 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 MED31Q9Y3C7 131 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 TLR4O00206 839 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 RCBTB2O95199 551 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 SEMA4FO95754 770 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 CD9P21926 228 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 FAUP35544 74 aaKnown RBP14.84□□□□□ -0.03
TIMP3-201ENST00000266085 GRIN2CQ14957 1233 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 CCDC116Q8IYX3 515 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 PIGKQ92643 395 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 F2RL3Q96RI0 385 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 MAPKAP1Q9BPZ7 522 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 TRIM8Q9BZR9 551 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 TM9SF3Q9HD45 589 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 WBP11Q9Y2W2 641 aaKnown RBP14.84□□□□□ -0.03
TIMP3-201ENST00000266085 COL22A1Q8NFW1 1626 aaPredicted RBP14.84□□□□□ -0.03
TIMP3-201ENST00000266085 LOC100130705A0A1B0GUX0 176 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 SCDO00767 359 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 DHFRP00374 187 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 SMSP52788 366 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 DECR1Q16698 335 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 SYT16Q17RD7 645 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 TIGD6Q17RP2 521 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 BICRALQ6AI39 1079 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 SLC15A3Q8IY34 581 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 RBCK1Q9BYM8 510 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 UCK2Q9BZX2 261 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 DNMT3BQ9UBC3 853 aaKnown RBP14.84□□□□□ -0.03
TIMP3-201ENST00000266085 PCTPQ9UKL6 214 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 USP54Q70EL1 1684 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 EVPLQ92817 2033 aa14.84□□□□□ -0.03
TIMP3-201ENST00000266085 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.83□□□□□ -0.03
TIMP3-201ENST00000266085 FAM170BA6NMN3 283 aa14.83□□□□□ -0.03
TIMP3-201ENST00000266085 CD36P16671 472 aa14.83□□□□□ -0.03
TIMP3-201ENST00000266085 PRKACGP22612 351 aa14.83□□□□□ -0.03
TIMP3-201ENST00000266085 PPP2R2BQ00005 443 aa14.83□□□□□ -0.03
TIMP3-201ENST00000266085 BLOC1S3Q6QNY0 202 aa14.83□□□□□ -0.03
TIMP3-201ENST00000266085 AMIGO1Q86WK6 493 aa14.83□□□□□ -0.03
TIMP3-201ENST00000266085 AQP11Q8NBQ7 271 aa14.83□□□□□ -0.03
TIMP3-201ENST00000266085 OR5P2Q8WZ92 322 aa14.83□□□□□ -0.03
TIMP3-201ENST00000266085 L3HYPDHQ96EM0 354 aa14.83□□□□□ -0.03
TIMP3-201ENST00000266085 RPF2Q9H7B2 306 aaKnown RBP14.83□□□□□ -0.03
TIMP3-201ENST00000266085 SMURF2Q9HAU4 748 aa14.83□□□□□ -0.03
TIMP3-201ENST00000266085 ARNT2Q9HBZ2 717 aa14.83□□□□□ -0.03
TIMP3-201ENST00000266085 SPATA6Q9NWH7 488 aaPredicted RBP14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms