RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 RFTN2Q52LD8 501 aaPredicted RBP8.45□□□□□ -1.06
VAPB-201ENST00000265619 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.45□□□□□ -1.06
VAPB-201ENST00000265619 LRRC66Q68CR7 880 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 PAQR6Q6TCH4 344 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 HFE2Q6ZVN8 426 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 RASGRP3Q8IV61 690 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 STX19Q8N4C7 294 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 SYT14Q8NB59 555 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 TMEM145Q8NBT3 493 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 OR52B6Q8NGF0 335 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 OR8D4Q8NGM9 314 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 BTN2A2Q8WVV5 523 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 FCGR1BQ92637 280 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 PYURFQ96I23 114 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 B3GALT6Q96L58 329 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 HTATIP2Q9BUP3 242 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 RBCK1Q9BYM8 510 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 CUEDC1Q9NWM3 386 aaPredicted RBP8.45□□□□□ -1.06
VAPB-201ENST00000265619 SDHAF2Q9NX18 166 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 PLEKHB1Q9UF11 243 aaPredicted RBP8.45□□□□□ -1.06
VAPB-201ENST00000265619 TSR3Q9UJK0 312 aaKnown RBP8.45□□□□□ -1.06
VAPB-201ENST00000265619 PADI2Q9Y2J8 665 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 KLK4Q9Y5K2 254 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 A0A1B0GVM2 712 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 A0A1W2PPL8 197 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 DNASE2O00115 360 aaPredicted RBP8.45□□□□□ -1.06
VAPB-201ENST00000265619 SEC14L5O43304 696 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 PSIP1O75475 530 aaKnown RBP8.45□□□□□ -1.06
VAPB-201ENST00000265619 CRCPO75575 148 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 SRCP12931 536 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 HOXB1P14653 301 aaPredicted RBP8.45□□□□□ -1.06
VAPB-201ENST00000265619 ZP3P21754 424 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 CLDN20P56880 219 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 PUDPQ08623 228 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 HNRNPA0Q13151 305 aaKnown RBP8.45□□□□□ -1.06
VAPB-201ENST00000265619 UGT8Q16880 541 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 C18orf21Q32NC0 220 aaPredicted RBP8.45□□□□□ -1.06
VAPB-201ENST00000265619 OR2T5Q6IEZ7 315 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 CCDC36Q8IYA8 594 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 OR2T29Q8NH02 315 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 SCLYQ96I15 445 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 PITX2Q99697 317 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 TAPBPLQ9BX59 468 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 GABARAPL1Q9H0R8 117 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 RNF208Q9H0X6 261 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 PCDHB16Q9NRJ7 776 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 MS4A12Q9NXJ0 267 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 KIF17Q9P2E2 1029 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 TINAGQ9UJW2 476 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 ZNF222Q9UK12 451 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 LHX6Q9UPM6 363 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 TRPV2Q9Y5S1 764 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 PTCH2Q9Y6C5 1203 aa8.45□□□□□ -1.06
VAPB-201ENST00000265619 PRSS44E7EML9 344 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 VPS26AO75436 327 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 TOXO94900 526 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 CDRT1O95170 752 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 CRYBB2P43320 205 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 NDUFV1P49821 464 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 CRYBB1P53674 252 aaPredicted RBP8.44□□□□□ -1.06
VAPB-201ENST00000265619 DSG2Q14126 1118 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 TEAD4Q15561 434 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 DUSP6Q16828 381 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 TMIGD1Q6UXZ0 262 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 ZNF704Q6ZNC4 412 aaPredicted RBP8.44□□□□□ -1.06
VAPB-201ENST00000265619 WDR53Q7Z5U6 358 aaPredicted RBP8.44□□□□□ -1.06
VAPB-201ENST00000265619 ANKRD46Q86W74 232 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 EFHBQ8N7U6 833 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 TMEM203Q969S6 136 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 TBL1YQ9BQ87 522 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 TRPM5Q9NZQ8 1165 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 FNIP2Q9P278 1114 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 SAMHD1Q9Y3Z3 626 aaKnown RBP8.44□□□□□ -1.06
VAPB-201ENST00000265619 PCDHGB3Q9Y5G1 929 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 TTC3P53804 2025 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 FAM240BA0A1B0GVZ2 78 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 SLC35F4A4IF30 521 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 F8W036 122 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 STX16O14662 325 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 OR4Q2P0C623 313 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 NPR3P17342 541 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 NUP62P37198 522 aaPredicted RBP8.44□□□□□ -1.06
VAPB-201ENST00000265619 OR1G1P47890 313 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 ACLYP53396 1101 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 VSX2P58304 361 aaPredicted RBP8.44□□□□□ -1.06
VAPB-201ENST00000265619 CCDC85BQ15834 202 aaPredicted RBP8.44□□□□□ -1.06
VAPB-201ENST00000265619 FAM174BQ3ZCQ3 159 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 SLC39A12Q504Y0 691 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 C9orf57Q5W0N0 161 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 SPATA19Q7Z5L4 167 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 TMCO2Q7Z6W1 182 aaPredicted RBP8.44□□□□□ -1.06
VAPB-201ENST00000265619 C3orf58Q8NDZ4 430 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 TSPEARQ8WU66 669 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 WDFY2Q96P53 400 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 ATOH8Q96SQ7 321 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 CYP2S1Q96SQ9 504 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 PRKD2Q9BZL6 878 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 RBFOX1Q9NWB1 397 aaKnown RBP8.44□□□□□ -1.06
VAPB-201ENST00000265619 HCSTQ9UBK5 93 aa8.44□□□□□ -1.06
VAPB-201ENST00000265619 ERVW-1Q9UQF0 538 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms