RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 ALG10Q5BKT4 473 aa17.41■□□□□ 0.38
COL5A3-201ENST00000264828 DNM1P34Q6PK57 102 aa17.41■□□□□ 0.38
COL5A3-201ENST00000264828 SUSD1Q6UWL2 747 aa17.41■□□□□ 0.38
COL5A3-201ENST00000264828 NPAS3Q8IXF0 933 aa17.41■□□□□ 0.38
COL5A3-201ENST00000264828 OR4E2Q8NGC2 313 aa17.41■□□□□ 0.38
COL5A3-201ENST00000264828 ORAI3Q9BRQ5 295 aa17.41■□□□□ 0.38
COL5A3-201ENST00000264828 FZD8Q9H461 694 aa17.41■□□□□ 0.38
COL5A3-201ENST00000264828 POLMQ9NP87 494 aaPredicted RBP17.41■□□□□ 0.38
COL5A3-201ENST00000264828 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.41■□□□□ 0.38
COL5A3-201ENST00000264828 HTRA2O43464 458 aaPredicted RBP17.41■□□□□ 0.38
COL5A3-201ENST00000264828 OGDHQ02218 1023 aa17.41■□□□□ 0.38
COL5A3-201ENST00000264828 CRHR2Q13324 411 aa17.41■□□□□ 0.38
COL5A3-201ENST00000264828 TUBA3CQ13748 450 aa17.41■□□□□ 0.38
COL5A3-201ENST00000264828 SLC22A18Q96BI1 424 aa17.41■□□□□ 0.38
COL5A3-201ENST00000264828 SLC5A7Q9GZV3 580 aa17.41■□□□□ 0.38
COL5A3-201ENST00000264828 FBRSL1Q9HCM7 1045 aaKnown RBP17.41■□□□□ 0.38
COL5A3-201ENST00000264828 C14orf119Q9NWQ9 140 aa17.41■□□□□ 0.38
COL5A3-201ENST00000264828 PROM1O43490 865 aa17.41■□□□□ 0.38
COL5A3-201ENST00000264828 EOMESO95936 686 aa17.41■□□□□ 0.38
COL5A3-201ENST00000264828 EPCAMP16422 314 aa17.41■□□□□ 0.38
COL5A3-201ENST00000264828 KCNQ1P51787 676 aa17.41■□□□□ 0.38
COL5A3-201ENST00000264828 CAPZA1P52907 286 aa17.41■□□□□ 0.38
COL5A3-201ENST00000264828 RIN1Q13671 783 aa17.41■□□□□ 0.38
COL5A3-201ENST00000264828 UBXN2BQ14CS0 331 aa17.41■□□□□ 0.38
COL5A3-201ENST00000264828 SLC22A8Q8TCC7 542 aa17.41■□□□□ 0.38
COL5A3-201ENST00000264828 RIT1Q92963 219 aa17.41■□□□□ 0.38
COL5A3-201ENST00000264828 SCLYQ96I15 445 aa17.41■□□□□ 0.38
COL5A3-201ENST00000264828 ASPNQ9BXN1 380 aa17.41■□□□□ 0.38
COL5A3-201ENST00000264828 SLC29A3Q9BZD2 475 aa17.41■□□□□ 0.38
COL5A3-201ENST00000264828 WASHC1A8K0Z3 465 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 ENTPD1P49961 510 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 MECP2P51608 486 aaKnown RBP17.4■□□□□ 0.38
COL5A3-201ENST00000264828 WASH2PQ6VEQ5 465 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 VTCN1Q7Z7D3 282 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 LRRTM4Q86VH4 590 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 GALNT6Q8NCL4 622 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 GATAD2BQ8WXI9 593 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 DNAJA3Q96EY1 480 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 ZNF599Q96NL3 588 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 WDR37Q9Y2I8 494 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 NRP1O14786 923 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 ALPPL2P10696 532 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 EDNRBP24530 442 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 MEF2AQ02078 507 aaPredicted RBP17.4■□□□□ 0.38
COL5A3-201ENST00000264828 LRRC66Q68CR7 880 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 CMASQ8NFW8 434 aaPredicted RBP17.4■□□□□ 0.38
COL5A3-201ENST00000264828 TMED5Q9Y3A6 229 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 PCDHB14Q9Y5E9 798 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 DUOX1Q9NRD9 1551 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 CPED1A4D0V7 1026 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 MMP20O60882 483 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 TMEM41AQ96HV5 264 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 ZNF514Q96K75 400 aaPredicted RBP17.4■□□□□ 0.38
COL5A3-201ENST00000264828 EPYCQ99645 322 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 GPR22Q99680 433 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 WDR77Q9BQA1 342 aaPredicted RBP17.4■□□□□ 0.38
COL5A3-201ENST00000264828 COQ9O75208 318 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 PIAS4Q8N2W9 510 aaPredicted RBP17.4■□□□□ 0.38
COL5A3-201ENST00000264828 ZNF675Q8TD23 568 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 RAB8BQ92930 207 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 A0A1W2PPK0 400 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 SLITRK5O94991 958 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 HCAR3P49019 387 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 RAB39AQ14964 217 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 PTCHD3Q3KNS1 767 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 ZNF678Q5SXM1 525 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 HAGHLQ6PII5 290 aaPredicted RBP17.4■□□□□ 0.38
COL5A3-201ENST00000264828 TICAM1Q8IUC6 712 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 SLC44A3Q8N4M1 653 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 DERL2Q9GZP9 239 aa17.4■□□□□ 0.38
COL5A3-201ENST00000264828 PDGFRLQ15198 375 aa17.39■□□□□ 0.38
COL5A3-201ENST00000264828 TMCO2Q7Z6W1 182 aaPredicted RBP17.39■□□□□ 0.38
COL5A3-201ENST00000264828 RBPJLQ9UBG7 517 aa17.39■□□□□ 0.38
COL5A3-201ENST00000264828 A0A1W2PPL8 197 aa17.39■□□□□ 0.37
COL5A3-201ENST00000264828 M0R233 179 aa17.39■□□□□ 0.37
COL5A3-201ENST00000264828 RP2O75695 350 aa17.39■□□□□ 0.37
COL5A3-201ENST00000264828 CBSLP0DN79 551 aa17.39■□□□□ 0.37
COL5A3-201ENST00000264828 CBSP35520 551 aa17.39■□□□□ 0.37
COL5A3-201ENST00000264828 SOX2P48431 317 aa17.39■□□□□ 0.37
COL5A3-201ENST00000264828 TXNDC8Q6A555 127 aa17.39■□□□□ 0.37
COL5A3-201ENST00000264828 EIF5AL1Q6IS14 154 aaKnown RBP17.39■□□□□ 0.37
COL5A3-201ENST00000264828 IGDCC3Q8IVU1 814 aa17.39■□□□□ 0.37
COL5A3-201ENST00000264828 ZNF611Q8N823 705 aa17.39■□□□□ 0.37
COL5A3-201ENST00000264828 CAMKVQ8NCB2 501 aa17.39■□□□□ 0.37
COL5A3-201ENST00000264828 NSUN3Q9H649 340 aaKnown RBP17.39■□□□□ 0.37
COL5A3-201ENST00000264828 MUSKO15146 869 aa17.39■□□□□ 0.37
COL5A3-201ENST00000264828 BLKP51451 505 aa17.39■□□□□ 0.37
COL5A3-201ENST00000264828 LASP1Q14847 261 aaKnown RBP17.39■□□□□ 0.37
COL5A3-201ENST00000264828 ARSKQ6UWY0 536 aa17.39■□□□□ 0.37
COL5A3-201ENST00000264828 HMGN2P46Q86SG4 172 aa17.39■□□□□ 0.37
COL5A3-201ENST00000264828 GNPDA2Q8TDQ7 276 aa17.39■□□□□ 0.37
COL5A3-201ENST00000264828 C15orf40Q8WUR7 153 aa17.39■□□□□ 0.37
COL5A3-201ENST00000264828 SLCO2A1Q92959 643 aa17.39■□□□□ 0.37
COL5A3-201ENST00000264828 SDHAF3Q9NRP4 125 aa17.39■□□□□ 0.37
COL5A3-201ENST00000264828 EXTL2Q9UBQ6 330 aa17.39■□□□□ 0.37
COL5A3-201ENST00000264828 POP7O75817 140 aaKnown RBP17.39■□□□□ 0.37
COL5A3-201ENST00000264828 ZNF829Q3KNS6 432 aaPredicted RBP17.39■□□□□ 0.37
COL5A3-201ENST00000264828 OR51G2Q8NGK0 314 aa17.39■□□□□ 0.37
COL5A3-201ENST00000264828 SLC5A11Q8WWX8 675 aa17.39■□□□□ 0.37
COL5A3-201ENST00000264828 OSBPL2Q9H1P3 480 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms