RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 TMEM184CQ9NVA4 438 aa11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 NDUFB11Q9NX14 153 aa11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 ZNF282Q9UDV7 671 aaPredicted RBP11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 NBNO60934 754 aa11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 OAZ2O95190 189 aa11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 CYP17A1P05093 508 aa11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 HIST1H2AGP0C0S8 130 aaPredicted RBP11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 EPORP19235 508 aa11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 HIST1H2ADP20671 130 aa11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 PRKACBP22694 351 aa11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 MRPL28Q13084 256 aaKnown RBP11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 ZNF177Q13360 481 aaPredicted RBP11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 CPTPQ5TA50 214 aa11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 SPRYD7Q5W111 196 aa11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 FRMPD2BQ6IN97 320 aa11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 FAM151BQ6UXP7 276 aa11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 TSEN54Q7Z6J9 526 aaKnown RBP11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 TRIM48Q8IWZ4 208 aa11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 SLC34A3Q8N130 599 aa11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 PROKR2Q8NFJ6 384 aa11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 LKAAEAR1Q8TD35 194 aa11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 CREB3L4Q8TEY5 395 aa11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 GEMIN6Q8WXD5 167 aaKnown RBP11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 MYO19Q96H55 970 aa11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 HIST1H2AHQ96KK5 128 aa11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 FAM129BQ96TA1 746 aa11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 HIST1H2AJQ99878 128 aa11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 H2AFJQ9BTM1 129 aa11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 ARHGAP39Q9C0H5 1083 aa11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 MCOLN1Q9GZU1 580 aa11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 FZD3Q9NPG1 666 aa11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 LSM2Q9Y333 95 aaKnown RBP11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 RPL36Q9Y3U8 105 aaKnown RBP11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 SRCAPQ6ZRS2 3230 aa11.91□□□□□ -0.5
CHMP2B-201ENST00000263780 OTOFQ9HC10 1997 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 H3BM21 787 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 TRBC1P01850 177 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 PRKAR1AP10644 381 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 ALAS2P22557 587 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 AQP1P29972 269 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 KIR2DL3P43628 341 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 MAP2K3P46734 347 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 GPR15P49685 360 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 CRYBA2P53672 197 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 TWF1Q12792 350 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 MAB21L1Q13394 359 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 NFATC2Q13469 925 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 VEPH1Q14D04 833 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 GPR33Q49SQ1 333 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 TRIQKQ629K1 86 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 SAXO2Q658L1 398 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 LYPD8Q6UX82 237 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 CLECL1Q8IZS7 167 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 CAMKK1Q8N5S9 505 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 IL17RCQ8NAC3 791 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 VANGL1Q8TAA9 524 aaPredicted RBP11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 AP2M1Q96CW1 435 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 BEX2Q9BXY8 128 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 ANKRA2Q9H9E1 313 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 SLC25A19Q9HC21 320 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 MRPL39Q9NYK5 338 aaKnown RBP11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 VPS29Q9UBQ0 182 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 CRLS1Q9UJA2 301 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 STOML2Q9UJZ1 356 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 ZFP37Q9Y6Q3 630 aaPredicted RBP11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 NLRC5Q86WI3 1866 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 MYO16Q9Y6X6 1858 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 A0A1W2PQL4 384 aaPredicted RBP11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 CBX4O00257 560 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 CDRT1O95170 752 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 C8GP07360 202 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 HLA-EP13747 358 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 CBLP22681 906 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 ACRV1P26436 265 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 PTBP1P26599 531 aaKnown RBP eCLIP11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 SLC9A3P48764 834 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 TAF10Q12962 218 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 TATDN3Q17R31 274 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 BTBD16Q32M84 506 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 PLEKHH3Q7Z736 793 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 DUSP18Q8NEJ0 188 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 ANKK1Q8NFD2 765 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 DNAJA4Q8WW22 397 aaPredicted RBP11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 SAMD11Q96NU1 681 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 MED18Q9BUE0 208 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 BOCQ9BWV1 1114 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 EBPLQ9BY08 206 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 POLR2J2Q9GZM3 115 aaKnown RBP11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 TRIM45Q9H8W5 580 aaPredicted RBP11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 FTSJ1Q9UET6 329 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 NUP50Q9UKX7 468 aa11.9□□□□□ -0.5
CHMP2B-201ENST00000263780 GOLGB1Q14789 3259 aaKnown RBP11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 TRBV5-4A0A0C4DH59 114 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 A0A1W2PQ67 120 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 C1orf226A1L170 272 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 TMEM229AB2RXF0 380 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 SCAMP2O15127 329 aaKnown RBP11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 GADD45GO95257 159 aa11.89□□□□□ -0.51
CHMP2B-201ENST00000263780 NUDT7P0C024 238 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms