RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 ANKRD26P1Q6NSI1 321 aa21.81■■□□□ 1.08
SMARCB1-201ENST00000263121 ABHD17CQ6PCB6 329 aa21.81■■□□□ 1.08
SMARCB1-201ENST00000263121 RNF148Q8N7C7 305 aa21.81■■□□□ 1.08
SMARCB1-201ENST00000263121 DNAJB8Q8NHS0 232 aa21.81■■□□□ 1.08
SMARCB1-201ENST00000263121 DNAJB14Q8TBM8 379 aa21.81■■□□□ 1.08
SMARCB1-201ENST00000263121 CGREF1Q99674 301 aa21.81■■□□□ 1.08
SMARCB1-201ENST00000263121 C17orf62Q9BQA9 187 aa21.81■■□□□ 1.08
SMARCB1-201ENST00000263121 CAPN10Q9HC96 672 aa21.81■■□□□ 1.08
SMARCB1-201ENST00000263121 FSCN3Q9NQT6 498 aa21.81■■□□□ 1.08
SMARCB1-201ENST00000263121 FAM120CQ9NX05 1096 aaKnown RBP21.81■■□□□ 1.08
SMARCB1-201ENST00000263121 LRIT1Q9P2V4 623 aa21.81■■□□□ 1.08
SMARCB1-201ENST00000263121 SDK1Q7Z5N4 2213 aa21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 A0A0A6YYD5 115 aa21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 C15orf38-AP3S2A0A0A6YYH1 394 aa21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 A0A0J9YVX5 310 aa21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 ARHGAP10A1A4S6 786 aa21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 MAP3K7O43318 606 aa21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 ERI3O43414 337 aaKnown RBP21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 B3GALT4O96024 378 aa21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 IL3P08700 152 aa21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 FURINP09958 794 aa21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 LAMP1P11279 417 aa21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 RPL3P39023 403 aaKnown RBP21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 STXBP1P61764 594 aaKnown RBP21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 RGS1Q08116 209 aa21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 C2orf80Q0P641 193 aa21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 ANGPT1Q15389 498 aa21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 C6orf10Q5SRN2 563 aa21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 LRIF1Q5T3J3 769 aa21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 CPTPQ5TA50 214 aa21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 NANOGP8Q6NSW7 305 aa21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 ZNF793Q6ZN11 406 aa21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 R3HCC1LQ7Z5L2 792 aaKnown RBP21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 ARPINQ7Z6K5 226 aa21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 RABEPKQ7Z6M1 372 aa21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 CEP76Q8TAP6 659 aa21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 TM4SF18Q96CE8 201 aa21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 MTERF3Q96E29 417 aa21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 ITCHQ96J02 903 aa21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 KCNC2Q96PR1 638 aa21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 PRPF18Q99633 342 aaKnown RBP21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 DUSP26Q9BV47 211 aa21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 PAIP1Q9H074 479 aaKnown RBP21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 NANOGQ9H9S0 305 aa21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 PRDM7Q9NQW5 492 aa21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 NLGN3Q9NZ94 848 aa21.8■■□□□ 1.08
SMARCB1-201ENST00000263121 A0A096LPI6 279 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 TRBV5-3A0A0A0MS03 114 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 TMPRSS11DO60235 418 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 ATP6V1G2O95670 118 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 CFIP05156 583 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 ST6GAL1P15907 406 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 HOXB9P17482 250 aaPredicted RBP21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 SSR2P43308 183 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 PLIN5Q00G26 463 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 MC1RQ01726 317 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 SPATS1Q496A3 300 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 AMER3Q8N944 861 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 SRFBP1Q8NEF9 429 aaKnown RBP21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 SAP25Q8TEE9 199 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 TRAPPC9Q96Q05 1148 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 TBCDQ9BTW9 1192 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 RAB33BQ9H082 229 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 VAPAQ9P0L0 249 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 SUCOQ9UBS9 1254 aaKnown RBP21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 A0A0G2JN53 185 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 P2RX6O15547 441 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 DFNA5O60443 496 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 ERN1O75460 977 aaKnown RBP21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 SLC35G6P0C7Q6 338 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 GLB1P16278 677 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 CDH3P22223 829 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 PTPN6P29350 595 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 TSFMP43897 325 aaKnown RBP21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 TRA2BP62995 288 aaKnown RBP21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 KLC1Q07866 573 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 NR1D2Q14995 579 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 ZNF385BQ569K4 471 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 RABL3Q5HYI8 236 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 FRMPD2BQ6IN97 320 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 IRGCQ6NXR0 463 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 TRIM40Q6P9F5 258 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 ANKRD46Q86W74 232 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 MSRB3Q8IXL7 192 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 C19orf47Q8N9M1 422 aaKnown RBP21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 GAL3ST3Q96A11 431 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 INPP5KQ9BT40 448 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 TRIM8Q9BZR9 551 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 BHLHE41Q9C0J9 482 aaPredicted RBP21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 SLC25A37Q9NYZ2 338 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 EPHA6Q9UF33 1036 aa21.79■■□□□ 1.08
SMARCB1-201ENST00000263121 LOC105369274A0A096LPK9 316 aa21.78■■□□□ 1.08
SMARCB1-201ENST00000263121 LOC102723532A0A0G2JNH3 316 aa21.78■■□□□ 1.08
SMARCB1-201ENST00000263121 YKT6O15498 198 aa21.78■■□□□ 1.08
SMARCB1-201ENST00000263121 GATAD2AQ86YP4 633 aa21.78■■□□□ 1.08
SMARCB1-201ENST00000263121 OR4N4Q8N0Y3 316 aa21.78■■□□□ 1.08
SMARCB1-201ENST00000263121 KCT2Q8NC54 265 aa21.78■■□□□ 1.08
SMARCB1-201ENST00000263121 FAM156AQ8NDB6 213 aa21.78■■□□□ 1.08
SMARCB1-201ENST00000263121 ANKRD27Q96NW4 1050 aa21.78■■□□□ 1.08
SMARCB1-201ENST00000263121 IL21RQ9HBE5 538 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms