RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 ELAVL4P26378 380 aaKnown RBP11.49□□□□□ -0.57
TRAF4-202ENST00000262396 GABRB3P28472 473 aa11.49□□□□□ -0.57
TRAF4-202ENST00000262396 PTGER4P35408 488 aa11.49□□□□□ -0.57
TRAF4-202ENST00000262396 SCTRP47872 440 aa11.49□□□□□ -0.57
TRAF4-202ENST00000262396 CLCN2P51788 898 aa11.49□□□□□ -0.57
TRAF4-202ENST00000262396 SNRPNP63162 240 aaKnown RBP11.49□□□□□ -0.57
TRAF4-202ENST00000262396 MGAT5Q09328 741 aa11.49□□□□□ -0.57
TRAF4-202ENST00000262396 HYAL2Q12891 473 aa11.49□□□□□ -0.57
TRAF4-202ENST00000262396 NXPE4Q6UWF7 544 aa11.49□□□□□ -0.57
TRAF4-202ENST00000262396 QSOX2Q6ZRP7 698 aa11.49□□□□□ -0.57
TRAF4-202ENST00000262396 GALNT7Q86SF2 657 aa11.49□□□□□ -0.57
TRAF4-202ENST00000262396 ZGRF1Q86YA3 2104 aa11.49□□□□□ -0.57
TRAF4-202ENST00000262396 CNTN4Q8IWV2 1026 aa11.49□□□□□ -0.57
TRAF4-202ENST00000262396 LGI4Q8N135 537 aa11.49□□□□□ -0.57
TRAF4-202ENST00000262396 KRT78Q8N1N4 520 aa11.49□□□□□ -0.57
TRAF4-202ENST00000262396 KIF2BQ8N4N8 673 aa11.49□□□□□ -0.57
TRAF4-202ENST00000262396 MDS2Q8NDY4 140 aa11.49□□□□□ -0.57
TRAF4-202ENST00000262396 TTLQ8NG68 377 aa11.49□□□□□ -0.57
TRAF4-202ENST00000262396 OR4K1Q8NGD4 311 aa11.49□□□□□ -0.57
TRAF4-202ENST00000262396 UTP15Q8TED0 518 aaKnown RBP11.49□□□□□ -0.57
TRAF4-202ENST00000262396 THAP3Q8WTV1 239 aaPredicted RBP11.49□□□□□ -0.57
TRAF4-202ENST00000262396 ANP32BQ92688 251 aaKnown RBP11.49□□□□□ -0.57
TRAF4-202ENST00000262396 LRRC39Q96DD0 335 aa11.49□□□□□ -0.57
TRAF4-202ENST00000262396 CLK4Q9HAZ1 481 aaKnown RBP11.49□□□□□ -0.57
TRAF4-202ENST00000262396 LANCL2Q9NS86 450 aa11.49□□□□□ -0.57
TRAF4-202ENST00000262396 NSMCE4AQ9NXX6 385 aa11.49□□□□□ -0.57
TRAF4-202ENST00000262396 COQ3Q9NZJ6 369 aa11.49□□□□□ -0.57
TRAF4-202ENST00000262396 ERVK-11Q9UQG0 969 aa11.49□□□□□ -0.57
TRAF4-202ENST00000262396 TRBV11-1A0A0K0K1C0 115 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 FAM95CA0A1B0GW59 222 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 ANKDD1BA6NHY2 528 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 NCF1BA6NI72 391 aaPredicted RBP11.48□□□□□ -0.57
TRAF4-202ENST00000262396 SAGE2PA6NJ88 616 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 USP27XA6NNY8 438 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 NCF1CA8MVU1 366 aaPredicted RBP11.48□□□□□ -0.57
TRAF4-202ENST00000262396 CDK2AP1O14519 115 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 MYO1DO94832 1006 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 CLDN14O95500 239 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 IFNA16P05015 189 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 NCF1P14598 390 aaPredicted RBP11.48□□□□□ -0.57
TRAF4-202ENST00000262396 GNAZP19086 355 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 GRNP28799 593 aaKnown RBP11.48□□□□□ -0.57
TRAF4-202ENST00000262396 TPP2P29144 1249 aaPredicted RBP11.48□□□□□ -0.57
TRAF4-202ENST00000262396 HNMTP50135 292 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 PGGT1BP53609 377 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 ITGA8P53708 1063 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 BTG2P78543 158 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 REEP5Q00765 189 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 PDIA2Q13087 525 aaKnown RBP11.48□□□□□ -0.57
TRAF4-202ENST00000262396 SLC13A2Q13183 592 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 BMPR2Q13873 1038 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 RCN2Q14257 317 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 ZNF630Q2M218 657 aaPredicted RBP11.48□□□□□ -0.57
TRAF4-202ENST00000262396 MSS51Q4VC12 460 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 CAPN12Q6ZSI9 719 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 ADAMTSL2Q86TH1 951 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 AFAP1L2Q8N4X5 818 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 SNX31Q8N9S9 440 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 CHTF18Q8WVB6 975 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 CDKL2Q92772 493 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 SCMH1Q96GD3 660 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 OR4K3Q96R72 315 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 OLFM1Q99784 485 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 CAPS2Q9BXY5 557 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 WWOXQ9NZC7 414 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 ITGB1BP2Q9UKP3 347 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 KLF13Q9Y2Y9 288 aaPredicted RBP11.48□□□□□ -0.57
TRAF4-202ENST00000262396 CROCCQ5TZA2 2017 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 HEATR5BQ9P2D3 2071 aa11.48□□□□□ -0.57
TRAF4-202ENST00000262396 CENPEQ02224 2701 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 CDC7O00311 574 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 ERI3O43414 337 aaKnown RBP11.47□□□□□ -0.57
TRAF4-202ENST00000262396 B3GALT2O43825 422 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 MAN1A2O60476 641 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 TPOP07202 933 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 SERPINA6P08185 405 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 C1GALT1C1LP0DN25 315 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 PRF1P14222 555 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 TNNI3P19429 210 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 HLCSP50747 726 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 TIAL1Q01085 375 aaKnown RBP eCLIP11.47□□□□□ -0.577e-6■■□□□ 11.9
TRAF4-202ENST00000262396 PLGLB1Q02325 96 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 TGM3Q08188 693 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 HIST2H2ACQ16777 129 aaPredicted RBP11.47□□□□□ -0.57
TRAF4-202ENST00000262396 HIST2H2AA3Q6FI13 130 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 TRIM40Q6P9F5 258 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 TRMT10BQ6PF06 316 aaKnown RBP11.47□□□□□ -0.57
TRAF4-202ENST00000262396 IGDCC3Q8IVU1 814 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 CEP97Q8IW35 865 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 SHISA5Q8N114 240 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 CYP4Z2PQ8N1L4 340 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 CPSF7Q8N684 471 aaKnown RBP11.47□□□□□ -0.57
TRAF4-202ENST00000262396 POGLUT1Q8NBL1 392 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 FBXO36Q8NEA4 188 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 ELP5Q8TE02 316 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 AGAP11Q8TF27 550 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 CA5BP1Q8WTZ4 195 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 MTFMTQ96DP5 389 aaKnown RBP11.47□□□□□ -0.57
TRAF4-202ENST00000262396 TSPAN17Q96FV3 270 aa11.47□□□□□ -0.57
TRAF4-202ENST00000262396 PDLIM5Q96HC4 596 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms