RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 C6orf47O95873 294 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 LHCGRP22888 699 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 CDC42P60953 191 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 RAE1P78406 368 aaKnown RBP16.76■□□□□ 0.27
TRAM1-201ENST00000262213 SCARB2Q14108 478 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 CCSMST1Q4G0I0 132 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 ZNF517Q6ZMY9 492 aaPredicted RBP16.76■□□□□ 0.27
TRAM1-201ENST00000262213 ZNF367Q7RTV3 350 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 DENND6BQ8NEG7 585 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 OR4C15Q8NGM1 316 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 CIDECQ96AQ7 238 aaPredicted RBP16.76■□□□□ 0.27
TRAM1-201ENST00000262213 ALG14Q96F25 216 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 CRELD1Q96HD1 420 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 OR2A14Q96R47 310 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 RAD9AQ99638 391 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 GPATCH2Q9NW75 528 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 CLEC2DQ9UHP7 191 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 TMA7Q9Y2S6 64 aaKnown RBP16.76■□□□□ 0.27
TRAM1-201ENST00000262213 CASP8AP2Q9UKL3 1982 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 PLK4O00444 970 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 SEPT4O43236 478 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 SOX14O95416 240 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 HNMTP50135 292 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 HBA1P69905 142 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 MC1RQ01726 317 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 BAK1Q16611 211 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 MLIPQ5VWP3 458 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 LAX1Q8IWV1 398 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 DCAF4L2Q8NA75 395 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 HJURPQ8NCD3 748 aaPredicted RBP16.76■□□□□ 0.27
TRAM1-201ENST00000262213 DEPDC7Q96QD5 511 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 SLC35A5Q9BS91 424 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 C2orf49Q9BVC5 232 aaPredicted RBP16.76■□□□□ 0.27
TRAM1-201ENST00000262213 OR2B2Q9GZK3 357 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 BRD9Q9H8M2 597 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 RAB23Q9ULC3 237 aa16.76■□□□□ 0.27
TRAM1-201ENST00000262213 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.75■□□□□ 0.27
TRAM1-201ENST00000262213 SLITRK5O94991 958 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 CCNB2O95067 398 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 IGHA2P01877 340 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 IGFBP1P08833 259 aaPredicted RBP16.75■□□□□ 0.27
TRAM1-201ENST00000262213 IDSP22304 550 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 SERPINA4P29622 427 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 CTSOP43234 321 aaPredicted RBP16.75■□□□□ 0.27
TRAM1-201ENST00000262213 PTSQ03393 145 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 TBRG1Q3YBR2 411 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 FAM26DQ5JW98 314 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 IER5LQ5T953 404 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 ATCAYQ86WG3 371 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 SLC34A3Q8N130 599 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 ARL14EPQ8N8R7 260 aaPredicted RBP16.75■□□□□ 0.27
TRAM1-201ENST00000262213 C17orf50Q8WW18 174 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 ZFYVE19Q96K21 471 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 DNAJC27Q9NZQ0 273 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 KLK4Q9Y5K2 254 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 SCN8AQ9UQD0 1980 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 PRAMEF33A0A0G2JMD5 474 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 TMEM202A6NGA9 273 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 CENPXA8MT69 81 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 RGS13O14921 159 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 PRMT3O60678 531 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 PRAMEF10O60809 474 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 CXCR2P25025 360 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 SOAT1P35610 550 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 BCDIN3DQ7Z5W3 292 aaKnown RBP16.75■□□□□ 0.27
TRAM1-201ENST00000262213 TAGAPQ8N103 731 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 CPA6Q8N4T0 437 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 WDR20Q8TBZ3 569 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 SCAMP4Q969E2 229 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 SAMD11Q96NU1 681 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 BARHL1Q9BZE3 327 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 CCDC177Q9NQR7 707 aaPredicted RBP16.75■□□□□ 0.27
TRAM1-201ENST00000262213 CLN6Q9NWW5 311 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 TMEM161AQ9NX61 479 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 TMPRSS11EQ9UL52 423 aa16.75■□□□□ 0.27
TRAM1-201ENST00000262213 MN1Q10571 1320 aaPredicted RBP16.74■□□□□ 0.27
TRAM1-201ENST00000262213 GADD45GO95257 159 aa16.74■□□□□ 0.27
TRAM1-201ENST00000262213 IGSF6O95976 241 aa16.74■□□□□ 0.27
TRAM1-201ENST00000262213 GASTP01350 101 aa16.74■□□□□ 0.27
TRAM1-201ENST00000262213 TUFMP49411 452 aaKnown RBP16.74■□□□□ 0.27
TRAM1-201ENST00000262213 FLT3LGP49771 235 aa16.74■□□□□ 0.27
TRAM1-201ENST00000262213 ZNF157P51786 506 aaPredicted RBP16.74■□□□□ 0.27
TRAM1-201ENST00000262213 STARD3Q14849 445 aa16.74■□□□□ 0.27
TRAM1-201ENST00000262213 TEAD4Q15561 434 aa16.74■□□□□ 0.27
TRAM1-201ENST00000262213 GCNT6Q5T4J0 391 aa16.74■□□□□ 0.27
TRAM1-201ENST00000262213 OTOP2Q7RTS6 562 aa16.74■□□□□ 0.27
TRAM1-201ENST00000262213 RNF130Q86XS8 419 aa16.74■□□□□ 0.27
TRAM1-201ENST00000262213 RAB43Q86YS6 212 aa16.74■□□□□ 0.27
TRAM1-201ENST00000262213 SLC44A2Q8IWA5 706 aaPredicted RBP16.74■□□□□ 0.27
TRAM1-201ENST00000262213 GALNT12Q8IXK2 581 aa16.74■□□□□ 0.27
TRAM1-201ENST00000262213 CASD1Q96PB1 797 aa16.74■□□□□ 0.27
TRAM1-201ENST00000262213 PKP4Q99569 1192 aa16.74■□□□□ 0.27
TRAM1-201ENST00000262213 ZDHHC6Q9H6R6 413 aa16.74■□□□□ 0.27
TRAM1-201ENST00000262213 DYRK4Q9NR20 520 aa16.74■□□□□ 0.27
TRAM1-201ENST00000262213 CRNNQ9UBG3 495 aaPredicted RBP16.74■□□□□ 0.27
TRAM1-201ENST00000262213 LRFN2Q9ULH4 789 aa16.74■□□□□ 0.27
TRAM1-201ENST00000262213 KLHL20Q9Y2M5 609 aa16.74■□□□□ 0.27
TRAM1-201ENST00000262213 ENTPD6O75354 484 aa16.74■□□□□ 0.27
TRAM1-201ENST00000262213 GALTP07902 379 aa16.74■□□□□ 0.27
TRAM1-201ENST00000262213 FHP07954 510 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms