RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 TMEM102Q8N9M5 508 aaPredicted RBP12.71□□□□□ -0.38
SGCA-201ENST00000262018 MCOLN3Q8TDD5 553 aa12.71□□□□□ -0.38
SGCA-201ENST00000262018 TWIST2Q8WVJ9 160 aa12.71□□□□□ -0.38
SGCA-201ENST00000262018 HIST1H2AHQ96KK5 128 aa12.71□□□□□ -0.38
SGCA-201ENST00000262018 PPP1R36Q96LQ0 422 aa12.71□□□□□ -0.38
SGCA-201ENST00000262018 BARD1Q99728 777 aaKnown RBP12.71□□□□□ -0.38
SGCA-201ENST00000262018 HIST1H2AJQ99878 128 aa12.71□□□□□ -0.38
SGCA-201ENST00000262018 H2AFJQ9BTM1 129 aa12.71□□□□□ -0.38
SGCA-201ENST00000262018 MMADHCQ9H3L0 296 aaPredicted RBP12.71□□□□□ -0.38
SGCA-201ENST00000262018 KLC4Q9NSK0 619 aa12.71□□□□□ -0.38
SGCA-201ENST00000262018 ARL15Q9NXU5 204 aa12.71□□□□□ -0.38
SGCA-201ENST00000262018 SNX7Q9UNH6 387 aa12.71□□□□□ -0.38
SGCA-201ENST00000262018 TACC2O95359 2948 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 PCSK5Q92824 1860 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 KIR2DS5A0A0G2JLQ3 304 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 A0A0G2JNG1 304 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 MGAT4DA6NG13 374 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 K7EPI3 171 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 KIR2DS3K7RE56 304 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 OR7A17O14581 309 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 MGRN1O60291 552 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 STK16O75716 305 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 WFS1O76024 890 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 ENO1P06733 434 aaKnown RBP12.7□□□□□ -0.38
SGCA-201ENST00000262018 F3P13726 295 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 COX6B1P14854 86 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 HOXB4P17483 251 aaPredicted RBP12.7□□□□□ -0.38
SGCA-201ENST00000262018 PRDX3P30048 256 aaKnown RBP12.7□□□□□ -0.38
SGCA-201ENST00000262018 PIK3CGP48736 1102 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 HNMTP50135 292 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 RRADP55042 308 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 PLOD1Q02809 727 aaPredicted RBP12.7□□□□□ -0.38
SGCA-201ENST00000262018 TRAF3Q13114 568 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 KLF10Q13118 480 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 ART3Q13508 389 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 KIR2DS5Q14953 304 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 NAA25Q14CX7 972 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 NXNQ6DKJ4 435 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 FAM92BQ6ZTR7 304 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 LARP4Q71RC2 724 aaKnown RBP eCLIP12.7□□□□□ -0.38
SGCA-201ENST00000262018 MED25Q71SY5 747 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 PRSS42Q7Z5A4 293 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 LILRA3Q8N6C8 439 aaPredicted RBP12.7□□□□□ -0.38
SGCA-201ENST00000262018 TEX9Q8N6V9 391 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 OR2L2Q8NH16 312 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 HM13Q8TCT9 377 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 SKA2Q8WVK7 121 aaPredicted RBP12.7□□□□□ -0.38
SGCA-201ENST00000262018 KLHL6Q8WZ60 621 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 FBXL8Q96CD0 374 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 KCNA7Q96RP8 456 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 TUBB1Q9H4B7 451 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 NOL11Q9H8H0 719 aaKnown RBP12.7□□□□□ -0.38
SGCA-201ENST00000262018 SLC40A1Q9NP59 571 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 OPTCQ9UBM4 332 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 SLC23A2Q9UGH3 650 aa12.7□□□□□ -0.38
SGCA-201ENST00000262018 ANKHD1Q8IWZ3 2542 aaKnown RBP12.7□□□□□ -0.38
SGCA-201ENST00000262018 DNHD1Q96M86 4753 aa12.69□□□□□ -0.38
SGCA-201ENST00000262018 PABPN1LA6NDY0 278 aaKnown RBP12.69□□□□□ -0.38
SGCA-201ENST00000262018 ARHGEF33A8MVX0 844 aa12.69□□□□□ -0.38
SGCA-201ENST00000262018 PIP5K1BO14986 540 aa12.69□□□□□ -0.38
SGCA-201ENST00000262018 CCNT2O60583 730 aaKnown RBP12.69□□□□□ -0.38
SGCA-201ENST00000262018 CRCPO75575 148 aa12.69□□□□□ -0.38
SGCA-201ENST00000262018 OR4F21O95013 312 aa12.69□□□□□ -0.38
SGCA-201ENST00000262018 OTCP00480 354 aa12.69□□□□□ -0.38
SGCA-201ENST00000262018 NELFEP18615 380 aaKnown RBP12.69□□□□□ -0.38
SGCA-201ENST00000262018 IDSP22304 550 aa12.69□□□□□ -0.38
SGCA-201ENST00000262018 PBLDP30039 288 aaPredicted RBP12.69□□□□□ -0.38
SGCA-201ENST00000262018 SLC6A12P48065 614 aa12.69□□□□□ -0.38
SGCA-201ENST00000262018 PREPP48147 710 aa12.69□□□□□ -0.38
SGCA-201ENST00000262018 ABRQ12979 859 aa12.69□□□□□ -0.38
SGCA-201ENST00000262018 KCNAB1Q14722 419 aa12.69□□□□□ -0.38
SGCA-201ENST00000262018 FAM69BQ5VUD6 431 aa12.69□□□□□ -0.38
SGCA-201ENST00000262018 TMEM198Q66K66 360 aa12.69□□□□□ -0.38
SGCA-201ENST00000262018 MBOAT1Q6ZNC8 495 aa12.69□□□□□ -0.38
SGCA-201ENST00000262018 LRRC70Q7Z2Q7 622 aa12.69□□□□□ -0.38
SGCA-201ENST00000262018 KIF2BQ8N4N8 673 aa12.69□□□□□ -0.38
SGCA-201ENST00000262018 AVL9Q8NBF6 648 aa12.69□□□□□ -0.38
SGCA-201ENST00000262018 FBXO15Q8NCQ5 510 aaPredicted RBP12.69□□□□□ -0.38
SGCA-201ENST00000262018 OR52B6Q8NGF0 335 aa12.69□□□□□ -0.38
SGCA-201ENST00000262018 CMTM5Q96DZ9 223 aa12.69□□□□□ -0.38
SGCA-201ENST00000262018 C3orf30Q96M34 536 aa12.69□□□□□ -0.38
SGCA-201ENST00000262018 FOPNLQ96NB1 174 aa12.69□□□□□ -0.38
SGCA-201ENST00000262018 FCRL4Q96PJ5 515 aa12.69□□□□□ -0.38
SGCA-201ENST00000262018 CCT7Q99832 543 aa12.69□□□□□ -0.38
SGCA-201ENST00000262018 BTBD10Q9BSF8 475 aa12.69□□□□□ -0.38
SGCA-201ENST00000262018 NTMT1Q9BV86 223 aa12.69□□□□□ -0.38
SGCA-201ENST00000262018 CHST8Q9H2A9 424 aa12.69□□□□□ -0.38
SGCA-201ENST00000262018 OSGEPL1Q9H4B0 414 aa12.69□□□□□ -0.38
SGCA-201ENST00000262018 IPPKQ9H8X2 491 aa12.69□□□□□ -0.38
SGCA-201ENST00000262018 PCDHGA10Q9Y5H3 936 aa12.69□□□□□ -0.38
SGCA-201ENST00000262018 KLF2Q9Y5W3 355 aaPredicted RBP12.69□□□□□ -0.38
SGCA-201ENST00000262018 A0A1B0GUH1 482 aa12.68□□□□□ -0.38
SGCA-201ENST00000262018 OR5K4A6NMS3 321 aa12.68□□□□□ -0.38
SGCA-201ENST00000262018 NADKO95544 446 aaPredicted RBP12.68□□□□□ -0.38
SGCA-201ENST00000262018 CHEK2O96017 543 aa12.68□□□□□ -0.38
SGCA-201ENST00000262018 CATP04040 527 aaKnown RBP12.68□□□□□ -0.38
SGCA-201ENST00000262018 FOLR1P15328 257 aa12.68□□□□□ -0.38
SGCA-201ENST00000262018 PDHA2P29803 388 aa12.68□□□□□ -0.38
SGCA-201ENST00000262018 KCNJ2P63252 427 aa12.68□□□□□ -0.38
SGCA-201ENST00000262018 UBE2IP63279 158 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms