RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 IGLV3-12A0A075B6K2 115 aa17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 SGK494L7N484 410 aa17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 FOXE1O00358 373 aaPredicted RBP17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 PEX12O00623 359 aa17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 PCDH17O14917 1159 aa17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 TM9SF1O15321 606 aa17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 NKX2-8O15522 239 aa17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 TRIM13O60858 407 aa17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 KLF7O75840 302 aaPredicted RBP17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 ITGB2P05107 769 aa17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 ZGLP1P0C6A0 271 aa17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 WT1P19544 449 aaPredicted RBP17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 RAP1GDS1P52306 607 aa17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 NAGLUP54802 743 aa17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 RAB8AP61006 207 aa17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 HYAL2Q12891 473 aa17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 TRAF3Q13114 568 aa17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 COL9A2Q14055 689 aaPredicted RBP17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 RCN2Q14257 317 aa17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 GPRIN3Q6ZVF9 776 aa17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 COX15Q7KZN9 410 aa17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 EXOC3L1Q86VI1 746 aa17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 AMER3Q8N944 861 aa17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 OR51Q1Q8NH59 317 aa17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 HUS1BQ8NHY5 278 aa17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 MS4A6EQ96DS6 147 aa17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 KCNC2Q96PR1 638 aa17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 CDK15Q96Q40 435 aa17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 KCNK9Q9NPC2 374 aa17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 NMRK1Q9NWW6 199 aa17.76■□□□□ 0.43
CYSTM1-201ENST00000261811 VSTM2BA6NLU5 285 aa17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 PSMD12O00232 456 aaPredicted RBP17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 B3GALT2O43825 422 aa17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 RDH16O75452 317 aa17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 ZWINTO95229 277 aa17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 TGFB1P01137 390 aa17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 KRT6AP02538 564 aa17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 KRT6BP04259 564 aa17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 ENO1P06733 434 aaKnown RBP17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 CYC1P08574 325 aa17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 HMOX2P30519 316 aa17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 HNRNPH1P31943 449 aaKnown RBP17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 TSFMP43897 325 aaKnown RBP17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 KRT6CP48668 564 aa17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 ARFIP1P53367 373 aa17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 BTN3A2P78410 334 aa17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 AP5B1Q2VPB7 878 aa17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 ADPRMQ3LIE5 342 aa17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 MFSD4BQ5TF39 518 aa17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 FRG2Q64ET8 278 aa17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 DTWD1Q8N5C7 304 aa17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 RGMAQ96B86 450 aa17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 FRG2BQ96QU4 278 aa17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 OR1F2PQ96R84 312 aa17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 MTERF1Q99551 399 aaKnown RBP17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 TBCDQ9BTW9 1192 aa17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 TRMOQ9BU70 441 aa17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 CRB3Q9BUF7 120 aa17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 NPLQ9BXD5 320 aaPredicted RBP17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 MS4A8Q9BY19 250 aa17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 SLC29A3Q9BZD2 475 aa17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 KLHL31Q9H511 634 aa17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 SOX17Q9H6I2 414 aaPredicted RBP17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 HCN3Q9P1Z3 774 aa17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 CTSFQ9UBX1 484 aa17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 ZZEF1O43149 2961 aa17.75■□□□□ 0.43
CYSTM1-201ENST00000261811 TYROBPO43914 113 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 CRCPO75575 148 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 HEXBP07686 556 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 SMIM10L1P0DMW3 83 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 H2AFXP16104 143 aaPredicted RBP17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 TSPAN8P19075 237 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 JAK1P23458 1154 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 OTX2P32243 289 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 XCR1P46094 333 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 PLA2G16P53816 162 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 RRADP55042 308 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 MTTPP55157 894 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 ZNF33BQ06732 778 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 KLC1Q07866 573 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 PCLAFQ15004 111 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 VWA2Q5GFL6 755 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 TNFAIP8L3Q5GJ75 292 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 DEPDC1Q5TB30 811 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 KHDRBS2Q5VWX1 349 aaKnown RBP17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 FRMD7Q6ZUT3 714 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 RPS27LQ71UM5 84 aaKnown RBP17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 PRSS41Q7RTY9 318 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 VN1R5Q7Z5H4 357 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 C10orf107Q8IVU9 208 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 METTL6Q8TCB7 284 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 ADAMTS18Q8TE60 1221 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 METTL21AQ8WXB1 218 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 SMIM10Q96HG1 83 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 CNDP1Q96KN2 507 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 F2RL3Q96RI0 385 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 SERINC2Q96SA4 455 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 SERPINI1Q99574 410 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 SPSB2Q99619 263 aa17.74■□□□□ 0.43
CYSTM1-201ENST00000261811 ARHGAP9Q9BRR9 750 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms