RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 C8GP07360 202 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 HLA-EP13747 358 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 JUPP14923 745 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 ITGA1P56199 1179 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 KCNJ10P78508 379 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 RGNQ15493 299 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 RSBN1Q5VWQ0 802 aaPredicted RBP13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 GAREM2Q75VX8 874 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 FAM217AQ8IXS0 508 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 RAVER1Q8IY67 606 aaKnown RBP13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 NFKBIDQ8NI38 313 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 C2orf15Q8WU43 125 aaKnown RBP13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 FBLIM1Q8WUP2 373 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 DDX28Q9NUL7 540 aaKnown RBP13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 RUVBL1Q9Y265 456 aaKnown RBP13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 TMED5Q9Y3A6 229 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 WDR87Q6ZQQ6 2873 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 KCNE1BA0A087WTH5 132 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 PNMA8CA0A1B0GUJ8 204 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 AGAP5A6NIR3 686 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 EFCAB14O75071 495 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 RPLP0P05388 317 aaKnown RBP13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 PPM1AP35813 382 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 FEN1P39748 380 aaKnown RBP13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 RPS13P62277 151 aaKnown RBP13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 HTRA4P83105 476 aaPredicted RBP13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 CSTF3Q12996 717 aaKnown RBP13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 CDKN3Q16667 212 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 CCBE1Q6UXH8 406 aaPredicted RBP13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 CHRDL2Q6WN34 429 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 FAM124AQ86V42 546 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 ZNF366Q8N895 744 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 SCRN2Q96FV2 425 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 HRASLS5Q96KN8 279 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 C7orf34Q96L11 122 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 DOHHQ9BU89 302 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 YIPF2Q9BWQ6 316 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 BTBD2Q9BX70 525 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 MTIF3Q9H2K0 278 aaKnown RBP13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 MMP27Q9H306 513 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 MTG2Q9H4K7 406 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 NDUFAF4Q9P032 175 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 ANKMY1Q9P2S6 941 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 OSGIN1Q9UJX0 560 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 ZNF232Q9UNY5 417 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 HSPE1-MOB4S4R3N1 261 aa13.91□□□□□ -0.18
SFSWAP-201ENST00000261674 A8MV72 311 aaPredicted RBP13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 PCDH17O14917 1159 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 MED26O95402 600 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 C6orf47O95873 294 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 ACVR2AP27037 513 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 CHI3L1P36222 383 aaPredicted RBP13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 SPANXN2Q5MJ10 180 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 AGTRAPQ6RW13 159 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 GATAD2AQ86YP4 633 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 NPAS3Q8IXF0 933 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 PARP16Q8N5Y8 322 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 MRPL43Q8N983 215 aaKnown RBP13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 ATL1Q8WXF7 558 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 CIDECQ96AQ7 238 aaPredicted RBP13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 OR5M11Q96RB7 305 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 CCM2Q9BSQ5 444 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 OR51B5Q9H339 312 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 EHD1Q9H4M9 534 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 LYVE1Q9Y5Y7 322 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 MYO10Q9HD67 2058 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 CLCA1A8K7I4 914 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 ABLIM3O94929 683 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 MFN2O95140 757 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 SLC16A8O95907 504 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 ADH1AP07327 375 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 CKMT1AP12532 417 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 IL1RNP18510 177 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 CRYBA2P53672 197 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 SZRD1Q7Z422 152 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 C11orf74Q86VG3 221 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 CHCHD4Q8N4Q1 142 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 SCAIQ8N9R8 606 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 L3MBTL4Q8NA19 623 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 TMEM159Q96B96 161 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 CEP44Q9C0F1 390 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 FAM120CQ9NX05 1096 aaKnown RBP13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 EHD3Q9NZN3 535 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 TMPRSS11EQ9UL52 423 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 SSX4O60224 188 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 KCNK2O95069 426 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 SRCP12931 536 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 ETV3P41162 512 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 COPZ1P61923 177 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 HBA1P69905 142 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 TSTQ16762 297 aaKnown RBP13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 DNAJC22Q8N4W6 341 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 CELF2-AS1Q8N7Q2 184 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 HUS1BQ8NHY5 278 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 CLP1Q92989 425 aaKnown RBP13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 SLC35B4Q969S0 331 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 SAMD11Q96NU1 681 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 VPS35Q96QK1 796 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 PKP4Q99569 1192 aa13.9□□□□□ -0.18
SFSWAP-201ENST00000261674 ACAT2Q9BWD1 397 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms